Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 JIP4YDR475C 2631 nt6.87□□□□□ -1.31
TY1A-LR1P0CX68 ASN2YGR124W 1719 nt6.87□□□□□ -1.31
TY1A-LR1P0CX68 15S_rRNA15S_rRNA 1649 nt6.87□□□□□ -1.31
TY1A-LR1P0CX68 UGA3YDL170W 1587 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 MAM3YOL060C 2121 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 EMP47YFL048C 1338 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 YDL057WYDL057W 987 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 RPL2AYFR031C-A 765 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 YGL041W-AYGL041W-A 465 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 GTR2YGR163W 1026 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 YHR125WYHR125W 306 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 PCL7YIL050W 858 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 POR1YNL055C 852 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 FMP41YNL168C 780 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 MED7YOL135C 669 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 YOL163WYOL163W 510 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 BUB3YOR026W 1026 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 CUE5YOR042W 1236 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 YOR231C-AYOR231C-A 201 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 SEC66YBR171W 621 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 AEP2YMR282C 1743 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 RSC2YLR357W 2670 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 HFD1YMR110C 1599 nt6.86□□□□□ -1.31
TY1A-LR1P0CX68 IBA57YJR122W 1494 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 HRB1YNL004W 1365 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 YFL002W-BYFL002W-B 1317 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 YGR161W-AYGR161W-A 1317 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 YBL100W-AYBL100W-A 1317 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 YCL020WYCL020W 1317 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 ALG9YNL219C 1668 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 SEC24YIL109C 2781 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 PAR32YDL173W 888 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 GTS1YGL181W 1191 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 MND1YGL183C 660 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 YKR012CYKR012C 378 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 UBI4YLL039C 1146 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 SUA7YPR086W 1038 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 GYP8YFL027C 1494 nt6.85□□□□□ -1.31
TY1A-LR1P0CX68 PDC5YLR134W 1692 nt6.84□□□□□ -1.31
TY1A-LR1P0CX68 GRX3YDR098C 858 nt6.84□□□□□ -1.31
TY1A-LR1P0CX68 GIR2YDR152W 798 nt6.84□□□□□ -1.31
TY1A-LR1P0CX68 RPS20YHL015W 366 nt6.84□□□□□ -1.31
TY1A-LR1P0CX68 GVP36YIL041W 981 nt6.84□□□□□ -1.31
TY1A-LR1P0CX68 YKL136WYKL136W 399 nt6.84□□□□□ -1.31
TY1A-LR1P0CX68 YMR099CYMR099C 894 nt6.84□□□□□ -1.31
TY1A-LR1P0CX68 YPL222C-AYPL222C-A 246 nt6.84□□□□□ -1.31
TY1A-LR1P0CX68 CMD1YBR109C 444 nt6.84□□□□□ -1.31
TY1A-LR1P0CX68 PBN1YCL052C 1251 nt6.84□□□□□ -1.31
TY1A-LR1P0CX68 COQ1YBR003W 1422 nt6.84□□□□□ -1.32
TY1A-LR1P0CX68 ATG7YHR171W 1893 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 MIC60YKR016W 1623 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 ORC6YHR118C 1308 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 YBR056WYBR056W 1506 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 PRM2YIL037C 1971 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 UBC9YDL064W 474 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 GLY1YEL046C 1164 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 YGL007C-AYGL007C-A 87 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 PIH1YHR034C 1035 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 YIL021C-AYIL021C-A 270 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 YJR107WYJR107W 987 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 DPH5YLR172C 903 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 BER1YLR412W 825 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 YPL197CYPL197C 414 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 MRPL27YBR282W 441 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 GYP1YOR070C 1914 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 GGA1YDR358W 1674 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 TMS1YDR105C 1422 nt6.83□□□□□ -1.32
TY1A-LR1P0CX68 PPS1YBR276C 2424 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 RPN4YDL020C 1596 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 CNA1YLR433C 1662 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 ARP4YJL081C 1470 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 NFS1YCL017C 1494 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 VPS61YDR136C 573 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 YDR269CYDR269C 324 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 RSM18YER050C 417 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 THI5YFL058W 1023 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 TOS8YGL096W 831 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 PET54YGR222W 882 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 GIM5YML094W 492 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 IMP1YMR150C 573 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 AGE1YDR524C 1449 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 TPO1YLL028W 1761 nt6.82□□□□□ -1.32
TY1A-LR1P0CX68 YMR018WYMR018W 1545 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 NUP84YDL116W 2181 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 PNS1YOR161C 1620 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 snR8snR8 190 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 YDR461C-AYDR461C-A 243 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 BIM1YER016W 1035 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 YIL029W-AYIL029W-A 372 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 MRPL44YMR225C 297 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 YNR021WYNR021W 1215 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 PHO5YBR093C 1404 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 PRB1YEL060C 1908 nt6.81□□□□□ -1.32
TY1A-LR1P0CX68 DAS1YJL149W 1992 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 HEM1YDR232W 1647 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 FAA4YMR246W 2085 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 YCR041WYCR041W 333 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 FPR2YDR519W 408 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 PET130YJL023C 1044 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 SYN8YAL014C 768 nt6.8□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 22.9 ms