Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBCP0CG48 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.58■□□□□ 0.72
UBCP0CG48 AC004987.1-201ENST00000428627 508 ntBASIC19.58■□□□□ 0.72
UBCP0CG48 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.58■□□□□ 0.72
UBCP0CG48 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
UBCP0CG48 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
UBCP0CG48 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBCP0CG48 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBCP0CG48 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
UBCP0CG48 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.58■□□□□ 0.72
UBCP0CG48 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.57■□□□□ 0.72
UBCP0CG48 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBCP0CG48 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
UBCP0CG48 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBCP0CG48 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
UBCP0CG48 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBCP0CG48 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBCP0CG48 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBCP0CG48 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBCP0CG48 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UBCP0CG48 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBCP0CG48 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBCP0CG48 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBCP0CG48 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.56■□□□□ 0.72
UBCP0CG48 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBCP0CG48 AL024507.2-201ENST00000606070 2574 ntBASIC19.56■□□□□ 0.72
UBCP0CG48 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBCP0CG48 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBCP0CG48 ESRRAP2-201ENST00000418437 1549 ntBASIC19.56■□□□□ 0.72
UBCP0CG48 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
UBCP0CG48 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.56■□□□□ 0.72
UBCP0CG48 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBCP0CG48 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBCP0CG48 TSPY13P-201ENST00000338964 914 ntBASIC19.55■□□□□ 0.72
UBCP0CG48 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBCP0CG48 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.55■□□□□ 0.72
UBCP0CG48 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBCP0CG48 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.55■□□□□ 0.72
UBCP0CG48 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBCP0CG48 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.55■□□□□ 0.72
UBCP0CG48 PVT1_1.1-201ENST00000615125 194 ntBASIC19.55■□□□□ 0.72
UBCP0CG48 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBCP0CG48 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBCP0CG48 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.55■□□□□ 0.72
UBCP0CG48 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.55■□□□□ 0.72
UBCP0CG48 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBCP0CG48 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBCP0CG48 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.54■□□□□ 0.72
UBCP0CG48 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.54■□□□□ 0.72
UBCP0CG48 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBCP0CG48 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBCP0CG48 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
UBCP0CG48 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.54■□□□□ 0.72
UBCP0CG48 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBCP0CG48 EP400NL-214ENST00000641289 2402 ntBASIC19.54■□□□□ 0.72
UBCP0CG48 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBCP0CG48 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
UBCP0CG48 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBCP0CG48 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBCP0CG48 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.54■□□□□ 0.72
UBCP0CG48 ECEL1P1-201ENST00000373592 1742 ntBASIC19.54■□□□□ 0.72
UBCP0CG48 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBCP0CG48 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBCP0CG48 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBCP0CG48 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBCP0CG48 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
UBCP0CG48 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBCP0CG48 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UBCP0CG48 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBCP0CG48 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.53■□□□□ 0.72
UBCP0CG48 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.53■□□□□ 0.72
UBCP0CG48 AC010980.1-201ENST00000587192 1142 ntBASIC19.53■□□□□ 0.72
UBCP0CG48 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBCP0CG48 LINC00526-201ENST00000581067 1875 ntBASIC19.53■□□□□ 0.72
UBCP0CG48 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UBCP0CG48 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.53■□□□□ 0.72
UBCP0CG48 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBCP0CG48 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UBCP0CG48 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UBCP0CG48 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBCP0CG48 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBCP0CG48 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBCP0CG48 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBCP0CG48 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
UBCP0CG48 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.52■□□□□ 0.72
UBCP0CG48 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBCP0CG48 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
UBCP0CG48 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBCP0CG48 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBCP0CG48 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.51■□□□□ 0.71
UBCP0CG48 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.51■□□□□ 0.71
UBCP0CG48 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.51■□□□□ 0.71
UBCP0CG48 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.51■□□□□ 0.71
UBCP0CG48 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.51■□□□□ 0.71
UBCP0CG48 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBCP0CG48 AC127496.7-201ENST00000625110 1798 ntBASIC19.51■□□□□ 0.71
UBCP0CG48 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBCP0CG48 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
UBCP0CG48 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBCP0CG48 LINC00565-201ENST00000562710 2331 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms