Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 AC097381.1-201ENST00000429019 1296 ntBASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.13■□□□□ 0.97
RAB40ALP0C0E4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB40ALP0C0E4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB40ALP0C0E4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB40ALP0C0E4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB40ALP0C0E4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB40ALP0C0E4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB40ALP0C0E4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RAB40ALP0C0E4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB40ALP0C0E4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB40ALP0C0E4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB40ALP0C0E4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB40ALP0C0E4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.11■□□□□ 0.97
RAB40ALP0C0E4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB40ALP0C0E4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RAB40ALP0C0E4 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.11■□□□□ 0.97
RAB40ALP0C0E4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAB40ALP0C0E4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB40ALP0C0E4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB40ALP0C0E4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB40ALP0C0E4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 FP325331.1-202ENST00000623531 1380 ntBASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RAB40ALP0C0E4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RAB40ALP0C0E4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAB40ALP0C0E4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB40ALP0C0E4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RAB40ALP0C0E4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.08■□□□□ 0.96
RAB40ALP0C0E4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RAB40ALP0C0E4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 AC126544.1-201ENST00000580842 1059 ntBASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 AC104564.3-201ENST00000582367 638 ntBASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 AC092666.2-201ENST00000613287 246 ntBASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB40ALP0C0E4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 AL499627.2-201ENST00000606283 725 ntBASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40ALP0C0E4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms