Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CYP3A4P08684 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.38■■□□□ 1.65
CYP3A4P08684 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CYP3A4P08684 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.38■■□□□ 1.65
CYP3A4P08684 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
CYP3A4P08684 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CYP3A4P08684 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.38■■□□□ 1.65
CYP3A4P08684 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.38■■□□□ 1.65
CYP3A4P08684 pRNA.6-201ENST00000610482 90 ntBASIC25.38■■□□□ 1.65
CYP3A4P08684 pRNA.5-201ENST00000612139 90 ntBASIC25.38■■□□□ 1.65
CYP3A4P08684 pRNA.11-201ENST00000618423 90 ntBASIC25.38■■□□□ 1.65
CYP3A4P08684 pRNA.13-201ENST00000619112 90 ntBASIC25.38■■□□□ 1.65
CYP3A4P08684 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.38■■□□□ 1.65
CYP3A4P08684 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CYP3A4P08684 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CYP3A4P08684 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CYP3A4P08684 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.37■■□□□ 1.65
CYP3A4P08684 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CYP3A4P08684 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
CYP3A4P08684 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CYP3A4P08684 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CYP3A4P08684 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CYP3A4P08684 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.37■■□□□ 1.65
CYP3A4P08684 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.37■■□□□ 1.65
CYP3A4P08684 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.37■■□□□ 1.65
CYP3A4P08684 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CYP3A4P08684 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CYP3A4P08684 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CYP3A4P08684 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CYP3A4P08684 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CYP3A4P08684 AL031432.3-201ENST00000607698 485 ntBASIC25.36■■□□□ 1.65
CYP3A4P08684 AC136469.2-201ENST00000623944 1028 ntBASIC25.36■■□□□ 1.65
CYP3A4P08684 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CYP3A4P08684 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.36■■□□□ 1.65
CYP3A4P08684 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.36■■□□□ 1.65
CYP3A4P08684 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CYP3A4P08684 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CYP3A4P08684 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.36■■□□□ 1.65
CYP3A4P08684 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CYP3A4P08684 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CYP3A4P08684 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.35■■□□□ 1.65
CYP3A4P08684 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.35■■□□□ 1.65
CYP3A4P08684 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CYP3A4P08684 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.35■■□□□ 1.65
CYP3A4P08684 ANOS2P-203ENST00000472227 1816 ntBASIC25.35■■□□□ 1.65
CYP3A4P08684 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CYP3A4P08684 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.34■■□□□ 1.65
CYP3A4P08684 AC005837.3-201ENST00000612163 286 ntBASIC25.34■■□□□ 1.65
CYP3A4P08684 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CYP3A4P08684 AC092068.2-201ENST00000590491 1708 ntBASIC25.34■■□□□ 1.65
CYP3A4P08684 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.34■■□□□ 1.65
CYP3A4P08684 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.33■■□□□ 1.65
CYP3A4P08684 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CYP3A4P08684 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.33■■□□□ 1.65
CYP3A4P08684 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CYP3A4P08684 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CYP3A4P08684 EDA-201ENST00000338901 1233 ntBASIC25.33■■□□□ 1.65
CYP3A4P08684 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.33■■□□□ 1.65
CYP3A4P08684 MIR4767-201ENST00000582827 78 ntBASIC25.33■■□□□ 1.65
CYP3A4P08684 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CYP3A4P08684 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.33■■□□□ 1.65
CYP3A4P08684 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CYP3A4P08684 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CYP3A4P08684 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CYP3A4P08684 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.32■■□□□ 1.64
CYP3A4P08684 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.32■■□□□ 1.64
CYP3A4P08684 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CYP3A4P08684 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.31■■□□□ 1.64
CYP3A4P08684 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.31■■□□□ 1.64
CYP3A4P08684 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CYP3A4P08684 SUDS3P1-201ENST00000505831 966 ntBASIC25.31■■□□□ 1.64
CYP3A4P08684 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.31■■□□□ 1.64
CYP3A4P08684 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CYP3A4P08684 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.31■■□□□ 1.64
CYP3A4P08684 AL353803.4-201ENST00000565882 1934 ntBASIC25.31■■□□□ 1.64
CYP3A4P08684 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CYP3A4P08684 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CYP3A4P08684 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CYP3A4P08684 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.3■■□□□ 1.64
CYP3A4P08684 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.3■■□□□ 1.64
CYP3A4P08684 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.3■■□□□ 1.64
CYP3A4P08684 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CYP3A4P08684 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CYP3A4P08684 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CYP3A4P08684 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.3■■□□□ 1.64
CYP3A4P08684 AL355001.2-201ENST00000620617 1191 ntBASIC25.3■■□□□ 1.64
CYP3A4P08684 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CYP3A4P08684 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CYP3A4P08684 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CYP3A4P08684 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CYP3A4P08684 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.29■■□□□ 1.64
CYP3A4P08684 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CYP3A4P08684 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CYP3A4P08684 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CYP3A4P08684 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.29■■□□□ 1.64
CYP3A4P08684 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.29■■□□□ 1.64
CYP3A4P08684 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CYP3A4P08684 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.29■■□□□ 1.64
CYP3A4P08684 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CYP3A4P08684 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms