Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 GUSBP5-201ENST00000418136 578 ntBASIC20.63■□□□□ 0.89
THBS1P07996 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
THBS1P07996 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
THBS1P07996 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.62■□□□□ 0.89
THBS1P07996 C1orf229-201ENST00000623686 2258 ntBASIC20.62■□□□□ 0.89
THBS1P07996 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
THBS1P07996 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
THBS1P07996 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.62■□□□□ 0.89
THBS1P07996 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
THBS1P07996 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.62■□□□□ 0.89
THBS1P07996 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.62■□□□□ 0.89
THBS1P07996 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.62■□□□□ 0.89
THBS1P07996 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.62■□□□□ 0.89
THBS1P07996 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
THBS1P07996 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
THBS1P07996 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.62■□□□□ 0.89
THBS1P07996 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.61■□□□□ 0.89
THBS1P07996 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.61■□□□□ 0.89
THBS1P07996 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
THBS1P07996 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
THBS1P07996 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THBS1P07996 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.61■□□□□ 0.89
THBS1P07996 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.61■□□□□ 0.89
THBS1P07996 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.61■□□□□ 0.89
THBS1P07996 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.61■□□□□ 0.89
THBS1P07996 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
THBS1P07996 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
THBS1P07996 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
THBS1P07996 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THBS1P07996 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.6■□□□□ 0.89
THBS1P07996 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
THBS1P07996 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THBS1P07996 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
THBS1P07996 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
THBS1P07996 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
THBS1P07996 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
THBS1P07996 AC233723.2-201ENST00000623798 2106 ntBASIC20.6■□□□□ 0.89
THBS1P07996 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.6■□□□□ 0.89
THBS1P07996 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
THBS1P07996 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THBS1P07996 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
THBS1P07996 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
THBS1P07996 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
THBS1P07996 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
THBS1P07996 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
THBS1P07996 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
THBS1P07996 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
THBS1P07996 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
THBS1P07996 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
THBS1P07996 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
THBS1P07996 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.59■□□□□ 0.89
THBS1P07996 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.59■□□□□ 0.89
THBS1P07996 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
THBS1P07996 AL117328.2-201ENST00000624617 1940 ntBASIC20.59■□□□□ 0.89
THBS1P07996 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.58■□□□□ 0.89
THBS1P07996 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.58■□□□□ 0.89
THBS1P07996 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
THBS1P07996 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
THBS1P07996 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
THBS1P07996 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
THBS1P07996 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
THBS1P07996 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.58■□□□□ 0.89
THBS1P07996 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
THBS1P07996 MIR4787-201ENST00000607364 84 ntBASIC20.58■□□□□ 0.89
THBS1P07996 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
THBS1P07996 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
THBS1P07996 AC079834.2-201ENST00000609776 1949 ntBASIC20.58■□□□□ 0.88
THBS1P07996 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
THBS1P07996 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.57■□□□□ 0.88
THBS1P07996 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
THBS1P07996 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
THBS1P07996 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.57■□□□□ 0.88
THBS1P07996 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
THBS1P07996 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
THBS1P07996 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.57■□□□□ 0.88
THBS1P07996 MTDHP2-201ENST00000601468 714 ntBASIC20.57■□□□□ 0.88
THBS1P07996 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.57■□□□□ 0.88
THBS1P07996 FP325331.1-202ENST00000623531 1380 ntBASIC20.57■□□□□ 0.88
THBS1P07996 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
THBS1P07996 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THBS1P07996 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.56■□□□□ 0.88
THBS1P07996 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THBS1P07996 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
THBS1P07996 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THBS1P07996 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THBS1P07996 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.56■□□□□ 0.88
THBS1P07996 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THBS1P07996 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.56■□□□□ 0.88
THBS1P07996 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
THBS1P07996 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.56■□□□□ 0.88
THBS1P07996 ESRRAP2-201ENST00000418437 1549 ntBASIC20.56■□□□□ 0.88
THBS1P07996 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.56■□□□□ 0.88
THBS1P07996 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.56■□□□□ 0.88
THBS1P07996 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
THBS1P07996 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
THBS1P07996 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
THBS1P07996 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
THBS1P07996 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.55■□□□□ 0.88
THBS1P07996 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
THBS1P07996 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms