Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.62■■□□□ 1.21
RETP07949 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETP07949 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.61■■□□□ 1.21
RETP07949 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETP07949 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.61■■□□□ 1.21
RETP07949 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.61■■□□□ 1.21
RETP07949 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETP07949 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
RETP07949 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.61■■□□□ 1.21
RETP07949 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETP07949 AC131274.2-201ENST00000580697 1507 ntBASIC22.61■■□□□ 1.21
RETP07949 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETP07949 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETP07949 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RETP07949 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETP07949 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETP07949 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETP07949 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETP07949 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RETP07949 CCDC92B-201ENST00000575506 885 ntBASIC22.6■■□□□ 1.21
RETP07949 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.6■■□□□ 1.21
RETP07949 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETP07949 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.6■■□□□ 1.21
RETP07949 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETP07949 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
RETP07949 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.6■■□□□ 1.21
RETP07949 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETP07949 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETP07949 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.6■■□□□ 1.21
RETP07949 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETP07949 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETP07949 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.59■■□□□ 1.21
RETP07949 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETP07949 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RETP07949 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.59■■□□□ 1.21
RETP07949 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.59■■□□□ 1.21
RETP07949 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETP07949 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RETP07949 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RETP07949 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
RETP07949 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.58■■□□□ 1.21
RETP07949 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.58■■□□□ 1.21
RETP07949 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.21
RETP07949 AL354811.1-201ENST00000610286 706 ntBASIC22.58■■□□□ 1.21
RETP07949 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RETP07949 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
RETP07949 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RETP07949 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RETP07949 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.57■■□□□ 1.2
RETP07949 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RETP07949 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RETP07949 MIR572-201ENST00000384983 95 ntBASIC22.57■■□□□ 1.2
RETP07949 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RETP07949 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.57■■□□□ 1.2
RETP07949 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.57■■□□□ 1.2
RETP07949 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.57■■□□□ 1.2
RETP07949 MIR6084-201ENST00000622012 110 ntBASIC22.57■■□□□ 1.2
RETP07949 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RETP07949 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RETP07949 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
RETP07949 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RETP07949 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.56■■□□□ 1.2
RETP07949 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RETP07949 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RETP07949 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.56■■□□□ 1.2
RETP07949 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RETP07949 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.56■■□□□ 1.2
RETP07949 AC012414.1-201ENST00000556676 535 ntBASIC22.56■■□□□ 1.2
RETP07949 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RETP07949 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RETP07949 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RETP07949 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RETP07949 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETP07949 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETP07949 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETP07949 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.55■■□□□ 1.2
RETP07949 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.55■■□□□ 1.2
RETP07949 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.55■■□□□ 1.2
RETP07949 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RETP07949 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.55■■□□□ 1.2
RETP07949 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETP07949 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.55■■□□□ 1.2
RETP07949 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RETP07949 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.54■■□□□ 1.2
RETP07949 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RETP07949 IGHV3-19-201ENST00000521488 291 ntBASIC22.54■■□□□ 1.2
RETP07949 KRT18P14-201ENST00000534205 1250 ntBASIC22.54■■□□□ 1.2
RETP07949 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETP07949 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.53■■□□□ 1.2
RETP07949 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETP07949 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RETP07949 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.53■■□□□ 1.2
RETP07949 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.53■■□□□ 1.2
RETP07949 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.53■■□□□ 1.2
RETP07949 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.53■■□□□ 1.2
RETP07949 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RETP07949 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.53■■□□□ 1.2
RETP07949 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RETP07949 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETP07949 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms