Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN2P05204 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HMGN2P05204 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.94■□□□□ 0.94
HMGN2P05204 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.94■□□□□ 0.94
HMGN2P05204 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN2P05204 AL353803.4-201ENST00000565882 1934 ntBASIC20.94■□□□□ 0.94
HMGN2P05204 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGN2P05204 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
HMGN2P05204 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HMGN2P05204 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.93■□□□□ 0.94
HMGN2P05204 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGN2P05204 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
HMGN2P05204 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGN2P05204 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGN2P05204 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.93■□□□□ 0.94
HMGN2P05204 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.93■□□□□ 0.94
HMGN2P05204 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGN2P05204 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.93■□□□□ 0.94
HMGN2P05204 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN2P05204 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN2P05204 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HMGN2P05204 TSPY9P-201ENST00000440215 945 ntBASIC20.92■□□□□ 0.94
HMGN2P05204 TSPY11P-201ENST00000442607 1045 ntBASIC20.92■□□□□ 0.94
HMGN2P05204 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN2P05204 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN2P05204 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN2P05204 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN2P05204 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HMGN2P05204 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN2P05204 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HMGN2P05204 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN2P05204 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGN2P05204 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HMGN2P05204 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGN2P05204 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGN2P05204 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGN2P05204 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGN2P05204 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGN2P05204 AC010997.5-201ENST00000609182 354 ntBASIC20.91■□□□□ 0.94
HMGN2P05204 AC144652.1-201ENST00000609974 1624 ntBASIC20.91■□□□□ 0.94
HMGN2P05204 C1orf229-201ENST00000623686 2258 ntBASIC20.91■□□□□ 0.94
HMGN2P05204 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN2P05204 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HMGN2P05204 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGN2P05204 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN2P05204 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN2P05204 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN2P05204 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGN2P05204 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.9■□□□□ 0.94
HMGN2P05204 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN2P05204 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN2P05204 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGN2P05204 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HMGN2P05204 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGN2P05204 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGN2P05204 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
HMGN2P05204 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HMGN2P05204 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.89■□□□□ 0.93
HMGN2P05204 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HMGN2P05204 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGN2P05204 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.89■□□□□ 0.93
HMGN2P05204 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGN2P05204 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
HMGN2P05204 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGN2P05204 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGN2P05204 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGN2P05204 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HMGN2P05204 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGN2P05204 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.88■□□□□ 0.93
HMGN2P05204 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.88■□□□□ 0.93
HMGN2P05204 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGN2P05204 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN2P05204 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN2P05204 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN2P05204 AL035685.1-201ENST00000636663 812 ntBASIC20.87■□□□□ 0.93
HMGN2P05204 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN2P05204 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN2P05204 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGN2P05204 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGN2P05204 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN2P05204 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN2P05204 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN2P05204 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN2P05204 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGN2P05204 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN2P05204 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGN2P05204 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN2P05204 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.86■□□□□ 0.93
HMGN2P05204 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGN2P05204 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.86■□□□□ 0.93
HMGN2P05204 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGN2P05204 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGN2P05204 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGN2P05204 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGN2P05204 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGN2P05204 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGN2P05204 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.85■□□□□ 0.93
HMGN2P05204 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGN2P05204 UNC93B8-201ENST00000511903 705 ntBASIC20.85■□□□□ 0.93
HMGN2P05204 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms