Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.31■■□□□ 1.16
NDUFS3O75489 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
NDUFS3O75489 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFS3O75489 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NDUFS3O75489 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NDUFS3O75489 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NDUFS3O75489 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
NDUFS3O75489 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NDUFS3O75489 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NDUFS3O75489 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.29■■□□□ 1.16
NDUFS3O75489 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.29■■□□□ 1.16
NDUFS3O75489 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.29■■□□□ 1.16
NDUFS3O75489 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
NDUFS3O75489 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS3O75489 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.29■■□□□ 1.16
NDUFS3O75489 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS3O75489 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS3O75489 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
NDUFS3O75489 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS3O75489 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NDUFS3O75489 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.28■■□□□ 1.16
NDUFS3O75489 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.28■■□□□ 1.16
NDUFS3O75489 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NDUFS3O75489 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.28■■□□□ 1.16
NDUFS3O75489 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NDUFS3O75489 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NDUFS3O75489 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NDUFS3O75489 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.27■■□□□ 1.16
NDUFS3O75489 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.27■■□□□ 1.16
NDUFS3O75489 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NDUFS3O75489 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
NDUFS3O75489 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.27■■□□□ 1.16
NDUFS3O75489 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NDUFS3O75489 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.27■■□□□ 1.16
NDUFS3O75489 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.27■■□□□ 1.16
NDUFS3O75489 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
NDUFS3O75489 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.27■■□□□ 1.16
NDUFS3O75489 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NDUFS3O75489 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFS3O75489 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFS3O75489 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.26■■□□□ 1.15
NDUFS3O75489 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFS3O75489 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFS3O75489 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFS3O75489 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
NDUFS3O75489 KRT16P3-201ENST00000439127 1283 ntBASIC22.26■■□□□ 1.15
NDUFS3O75489 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
NDUFS3O75489 MIR6724-1-201ENST00000616420 92 ntBASIC22.26■■□□□ 1.15
NDUFS3O75489 MIR6724-2-201ENST00000616483 92 ntBASIC22.26■■□□□ 1.15
NDUFS3O75489 MIR6724-4-201ENST00000617390 92 ntBASIC22.26■■□□□ 1.15
NDUFS3O75489 MIR6724-3-201ENST00000622482 92 ntBASIC22.26■■□□□ 1.15
NDUFS3O75489 AC144652.1-201ENST00000609974 1624 ntBASIC22.26■■□□□ 1.15
NDUFS3O75489 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.26■■□□□ 1.15
NDUFS3O75489 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NDUFS3O75489 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
NDUFS3O75489 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
NDUFS3O75489 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.26■■□□□ 1.15
NDUFS3O75489 AC133561.1-201ENST00000568600 2415 ntBASIC22.26■■□□□ 1.15
NDUFS3O75489 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.25■■□□□ 1.15
NDUFS3O75489 AL353803.4-201ENST00000565882 1934 ntBASIC22.25■■□□□ 1.15
NDUFS3O75489 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
NDUFS3O75489 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NDUFS3O75489 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NDUFS3O75489 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.25■■□□□ 1.15
NDUFS3O75489 GUSBP5-201ENST00000418136 578 ntBASIC22.25■■□□□ 1.15
NDUFS3O75489 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
NDUFS3O75489 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
NDUFS3O75489 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NDUFS3O75489 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NDUFS3O75489 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NDUFS3O75489 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NDUFS3O75489 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
NDUFS3O75489 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
NDUFS3O75489 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NDUFS3O75489 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NDUFS3O75489 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.24■■□□□ 1.15
NDUFS3O75489 AC012676.1-201ENST00000574705 1949 ntBASIC22.23■■□□□ 1.15
NDUFS3O75489 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NDUFS3O75489 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NDUFS3O75489 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NDUFS3O75489 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.23■■□□□ 1.15
NDUFS3O75489 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.23■■□□□ 1.15
NDUFS3O75489 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.23■■□□□ 1.15
NDUFS3O75489 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NDUFS3O75489 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NDUFS3O75489 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NDUFS3O75489 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NDUFS3O75489 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NDUFS3O75489 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.22■■□□□ 1.15
NDUFS3O75489 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.22■■□□□ 1.15
NDUFS3O75489 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.22■■□□□ 1.15
NDUFS3O75489 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.22■■□□□ 1.15
NDUFS3O75489 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NDUFS3O75489 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NDUFS3O75489 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.21■■□□□ 1.15
NDUFS3O75489 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.21■■□□□ 1.15
NDUFS3O75489 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.21■■□□□ 1.15
NDUFS3O75489 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.21■■□□□ 1.15
NDUFS3O75489 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NDUFS3O75489 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms