Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.42■■□□□ 1.02
CPNE3O75131 AC136469.2-201ENST00000623944 1028 ntBASIC21.42■■□□□ 1.02
CPNE3O75131 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.41■■□□□ 1.02
CPNE3O75131 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.41■■□□□ 1.02
CPNE3O75131 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE3O75131 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CPNE3O75131 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE3O75131 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.41■■□□□ 1.02
CPNE3O75131 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE3O75131 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE3O75131 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE3O75131 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CPNE3O75131 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE3O75131 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE3O75131 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE3O75131 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE3O75131 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE3O75131 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE3O75131 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CPNE3O75131 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE3O75131 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE3O75131 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE3O75131 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.4■■□□□ 1.02
CPNE3O75131 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE3O75131 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CPNE3O75131 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CPNE3O75131 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE3O75131 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE3O75131 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.4■■□□□ 1.02
CPNE3O75131 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE3O75131 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CPNE3O75131 RASA4CP-201ENST00000424092 1398 ntBASIC21.39■■□□□ 1.02
CPNE3O75131 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CPNE3O75131 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE3O75131 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE3O75131 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE3O75131 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE3O75131 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.39■■□□□ 1.01
CPNE3O75131 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CPNE3O75131 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CPNE3O75131 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE3O75131 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE3O75131 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE3O75131 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE3O75131 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.38■■□□□ 1.01
CPNE3O75131 RARRES2P6-201ENST00000567333 442 ntBASIC21.38■■□□□ 1.01
CPNE3O75131 MIR3181-201ENST00000578512 73 ntBASIC21.38■■□□□ 1.01
CPNE3O75131 CA15P2-201ENST00000611168 834 ntBASIC21.38■■□□□ 1.01
CPNE3O75131 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE3O75131 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE3O75131 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.38■■□□□ 1.01
CPNE3O75131 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.37■■□□□ 1.01
CPNE3O75131 AC138932.3-201ENST00000567634 1902 ntBASIC21.37■■□□□ 1.01
CPNE3O75131 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE3O75131 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE3O75131 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE3O75131 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.37■■□□□ 1.01
CPNE3O75131 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.37■■□□□ 1.01
CPNE3O75131 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CPNE3O75131 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.37■■□□□ 1.01
CPNE3O75131 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CPNE3O75131 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE3O75131 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CPNE3O75131 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE3O75131 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CPNE3O75131 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE3O75131 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE3O75131 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE3O75131 AC008764.7-201ENST00000593779 1081 ntBASIC21.36■■□□□ 1.01
CPNE3O75131 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE3O75131 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE3O75131 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.36■■□□□ 1.01
CPNE3O75131 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE3O75131 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE3O75131 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE3O75131 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CPNE3O75131 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE3O75131 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.35■■□□□ 1.01
CPNE3O75131 AC141586.4-201ENST00000624558 1573 ntBASIC21.35■■□□□ 1.01
CPNE3O75131 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE3O75131 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE3O75131 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CPNE3O75131 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE3O75131 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE3O75131 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE3O75131 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE3O75131 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE3O75131 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE3O75131 AC099791.1-201ENST00000416440 715 ntBASIC21.34■■□□□ 1.01
CPNE3O75131 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE3O75131 pRNA.6-201ENST00000610482 90 ntBASIC21.34■■□□□ 1.01
CPNE3O75131 pRNA.5-201ENST00000612139 90 ntBASIC21.34■■□□□ 1.01
CPNE3O75131 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
CPNE3O75131 pRNA.11-201ENST00000618423 90 ntBASIC21.34■■□□□ 1.01
CPNE3O75131 pRNA.13-201ENST00000619112 90 ntBASIC21.34■■□□□ 1.01
CPNE3O75131 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE3O75131 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.33■■□□□ 1.01
CPNE3O75131 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE3O75131 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE3O75131 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms