Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF2O60811 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PRAMEF2O60811 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF2O60811 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF2O60811 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF2O60811 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PRAMEF2O60811 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF2O60811 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PRAMEF2O60811 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF2O60811 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEF2O60811 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PRAMEF2O60811 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF2O60811 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF2O60811 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF2O60811 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF2O60811 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.99■□□□□ 0.95
PRAMEF2O60811 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF2O60811 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF2O60811 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PRAMEF2O60811 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF2O60811 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF2O60811 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.99■□□□□ 0.95
PRAMEF2O60811 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.99■□□□□ 0.95
PRAMEF2O60811 AC135279.3-201ENST00000610945 1311 ntBASIC20.99■□□□□ 0.95
PRAMEF2O60811 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF2O60811 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF2O60811 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.99■□□□□ 0.95
PRAMEF2O60811 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PRAMEF2O60811 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEF2O60811 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEF2O60811 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF2O60811 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF2O60811 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PRAMEF2O60811 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.98■□□□□ 0.95
PRAMEF2O60811 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF2O60811 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF2O60811 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF2O60811 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEF2O60811 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PRAMEF2O60811 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF2O60811 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF2O60811 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PRAMEF2O60811 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF2O60811 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PRAMEF2O60811 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.97■□□□□ 0.95
PRAMEF2O60811 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF2O60811 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF2O60811 AC142381.2-201ENST00000566120 298 ntBASIC20.97■□□□□ 0.95
PRAMEF2O60811 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF2O60811 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF2O60811 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF2O60811 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF2O60811 ANOS2P-203ENST00000472227 1816 ntBASIC20.97■□□□□ 0.95
PRAMEF2O60811 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEF2O60811 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PRAMEF2O60811 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.96■□□□□ 0.95
PRAMEF2O60811 DUX4L19-201ENST00000557448 1267 ntBASIC20.96■□□□□ 0.95
PRAMEF2O60811 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF2O60811 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF2O60811 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF2O60811 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF2O60811 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF2O60811 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF2O60811 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF2O60811 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF2O60811 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.95■□□□□ 0.94
PRAMEF2O60811 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.95■□□□□ 0.94
PRAMEF2O60811 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.95■□□□□ 0.94
PRAMEF2O60811 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF2O60811 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF2O60811 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF2O60811 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PRAMEF2O60811 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF2O60811 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
PRAMEF2O60811 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF2O60811 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF2O60811 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF2O60811 AC024257.2-201ENST00000549699 147 ntBASIC20.94■□□□□ 0.94
PRAMEF2O60811 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.94■□□□□ 0.94
PRAMEF2O60811 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEF2O60811 AC092068.2-201ENST00000590491 1708 ntBASIC20.94■□□□□ 0.94
PRAMEF2O60811 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF2O60811 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF2O60811 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.94■□□□□ 0.94
PRAMEF2O60811 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.93■□□□□ 0.94
PRAMEF2O60811 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PRAMEF2O60811 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF2O60811 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF2O60811 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF2O60811 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
PRAMEF2O60811 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.93■□□□□ 0.94
PRAMEF2O60811 AC092171.4-201ENST00000609130 632 ntBASIC20.93■□□□□ 0.94
PRAMEF2O60811 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.93■□□□□ 0.94
PRAMEF2O60811 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF2O60811 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRAMEF2O60811 AC009102.2-201ENST00000606772 1639 ntBASIC20.93■□□□□ 0.94
PRAMEF2O60811 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEF2O60811 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEF2O60811 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF2O60811 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms