Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF4O60810 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF4O60810 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF4O60810 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.63■■□□□ 1.05
PRAMEF4O60810 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF4O60810 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
PRAMEF4O60810 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF4O60810 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF4O60810 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.63■■□□□ 1.05
PRAMEF4O60810 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.63■■□□□ 1.05
PRAMEF4O60810 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.63■■□□□ 1.05
PRAMEF4O60810 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
PRAMEF4O60810 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PRAMEF4O60810 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PRAMEF4O60810 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF4O60810 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PRAMEF4O60810 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEF4O60810 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEF4O60810 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF4O60810 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.62■■□□□ 1.05
PRAMEF4O60810 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF4O60810 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEF4O60810 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.62■■□□□ 1.05
PRAMEF4O60810 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
PRAMEF4O60810 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PRAMEF4O60810 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF4O60810 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PRAMEF4O60810 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF4O60810 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.61■■□□□ 1.05
PRAMEF4O60810 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF4O60810 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.61■■□□□ 1.05
PRAMEF4O60810 AC009102.2-201ENST00000606772 1639 ntBASIC21.61■■□□□ 1.05
PRAMEF4O60810 AC144652.1-201ENST00000609974 1624 ntBASIC21.61■■□□□ 1.05
PRAMEF4O60810 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF4O60810 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF4O60810 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PRAMEF4O60810 C1orf229-201ENST00000623686 2258 ntBASIC21.6■■□□□ 1.05
PRAMEF4O60810 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF4O60810 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF4O60810 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
PRAMEF4O60810 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PRAMEF4O60810 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.6■■□□□ 1.05
PRAMEF4O60810 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.6■■□□□ 1.05
PRAMEF4O60810 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF4O60810 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF4O60810 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.6■■□□□ 1.05
PRAMEF4O60810 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF4O60810 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PRAMEF4O60810 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAMEF4O60810 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF4O60810 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF4O60810 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRAMEF4O60810 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PRAMEF4O60810 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.59■■□□□ 1.05
PRAMEF4O60810 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.59■■□□□ 1.05
PRAMEF4O60810 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PRAMEF4O60810 MIR6724-1-201ENST00000616420 92 ntBASIC21.58■■□□□ 1.05
PRAMEF4O60810 MIR6724-2-201ENST00000616483 92 ntBASIC21.58■■□□□ 1.05
PRAMEF4O60810 MIR6724-4-201ENST00000617390 92 ntBASIC21.58■■□□□ 1.05
PRAMEF4O60810 MIR6724-3-201ENST00000622482 92 ntBASIC21.58■■□□□ 1.05
PRAMEF4O60810 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.58■■□□□ 1.04
PRAMEF4O60810 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF4O60810 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF4O60810 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF4O60810 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PRAMEF4O60810 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF4O60810 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.57■■□□□ 1.04
PRAMEF4O60810 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF4O60810 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF4O60810 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF4O60810 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.57■■□□□ 1.04
PRAMEF4O60810 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF4O60810 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF4O60810 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF4O60810 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF4O60810 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.56■■□□□ 1.04
PRAMEF4O60810 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.56■■□□□ 1.04
PRAMEF4O60810 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.56■■□□□ 1.04
PRAMEF4O60810 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF4O60810 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
PRAMEF4O60810 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PRAMEF4O60810 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.56■■□□□ 1.04
PRAMEF4O60810 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF4O60810 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF4O60810 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.56■■□□□ 1.04
PRAMEF4O60810 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF4O60810 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF4O60810 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRAMEF4O60810 KRT16P3-201ENST00000439127 1283 ntBASIC21.55■■□□□ 1.04
PRAMEF4O60810 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.55■■□□□ 1.04
PRAMEF4O60810 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.55■■□□□ 1.04
PRAMEF4O60810 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRAMEF4O60810 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.55■■□□□ 1.04
PRAMEF4O60810 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.55■■□□□ 1.04
PRAMEF4O60810 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEF4O60810 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.54■■□□□ 1.04
PRAMEF4O60810 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEF4O60810 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEF4O60810 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.54■■□□□ 1.04
PRAMEF4O60810 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms