Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6DO43924 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PDE6DO43924 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6DO43924 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6DO43924 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6DO43924 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6DO43924 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.36■□□□□ 0.37
PDE6DO43924 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6DO43924 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.36■□□□□ 0.37
PDE6DO43924 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6DO43924 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PDE6DO43924 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6DO43924 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.36■□□□□ 0.37
PDE6DO43924 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6DO43924 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6DO43924 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6DO43924 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PDE6DO43924 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6DO43924 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6DO43924 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6DO43924 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6DO43924 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6DO43924 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.35■□□□□ 0.37
PDE6DO43924 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6DO43924 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PDE6DO43924 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE6DO43924 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6DO43924 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PDE6DO43924 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDE6DO43924 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PDE6DO43924 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDE6DO43924 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6DO43924 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6DO43924 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6DO43924 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6DO43924 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6DO43924 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE6DO43924 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6DO43924 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6DO43924 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDE6DO43924 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PDE6DO43924 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE6DO43924 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6DO43924 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6DO43924 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PDE6DO43924 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.33■□□□□ 0.37
PDE6DO43924 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6DO43924 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PDE6DO43924 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6DO43924 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6DO43924 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6DO43924 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
PDE6DO43924 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.33■□□□□ 0.37
PDE6DO43924 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6DO43924 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6DO43924 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6DO43924 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.33■□□□□ 0.36
PDE6DO43924 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PDE6DO43924 AL121603.2-201ENST00000557373 2117 ntBASIC17.33■□□□□ 0.36
PDE6DO43924 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE6DO43924 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PDE6DO43924 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6DO43924 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6DO43924 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6DO43924 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6DO43924 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6DO43924 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6DO43924 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6DO43924 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PDE6DO43924 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6DO43924 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6DO43924 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6DO43924 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PDE6DO43924 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6DO43924 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6DO43924 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PDE6DO43924 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6DO43924 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6DO43924 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6DO43924 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.31■□□□□ 0.36
PDE6DO43924 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PDE6DO43924 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PDE6DO43924 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6DO43924 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6DO43924 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PDE6DO43924 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PDE6DO43924 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6DO43924 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PDE6DO43924 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6DO43924 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6DO43924 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.3■□□□□ 0.36
PDE6DO43924 AC026310.3-201ENST00000625186 2373 ntBASIC17.3■□□□□ 0.36
PDE6DO43924 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6DO43924 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6DO43924 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.3■□□□□ 0.36
PDE6DO43924 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6DO43924 AL162393.1-201ENST00000437852 946 ntBASIC17.3■□□□□ 0.36
PDE6DO43924 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6DO43924 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDE6DO43924 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms