Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TO15178 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TO15178 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TO15178 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TO15178 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TO15178 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
TO15178 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.64■□□□□ 0.89
TO15178 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TO15178 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TO15178 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.64■□□□□ 0.89
TO15178 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TO15178 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TO15178 AL136116.3-201ENST00000402907 1138 ntBASIC20.64■□□□□ 0.89
TO15178 AC092171.4-201ENST00000609130 632 ntBASIC20.64■□□□□ 0.89
TO15178 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TO15178 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TO15178 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.64■□□□□ 0.89
TO15178 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TO15178 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TO15178 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TO15178 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TO15178 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.63■□□□□ 0.89
TO15178 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TO15178 AC008406.3-201ENST00000620001 1374 ntBASIC20.63■□□□□ 0.89
TO15178 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TO15178 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.63■□□□□ 0.89
TO15178 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.63■□□□□ 0.89
TO15178 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.63■□□□□ 0.89
TO15178 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TO15178 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TO15178 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.62■□□□□ 0.89
TO15178 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.62■□□□□ 0.89
TO15178 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.62■□□□□ 0.89
TO15178 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.62■□□□□ 0.89
TO15178 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TO15178 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TO15178 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
TO15178 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.61■□□□□ 0.89
TO15178 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TO15178 AL353803.4-201ENST00000565882 1934 ntBASIC20.61■□□□□ 0.89
TO15178 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TO15178 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TO15178 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.61■□□□□ 0.89
TO15178 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.61■□□□□ 0.89
TO15178 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TO15178 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.61■□□□□ 0.89
TO15178 AC099791.2-201ENST00000605725 427 ntBASIC20.61■□□□□ 0.89
TO15178 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TO15178 DUSP8P3-201ENST00000399571 1760 ntBASIC20.61■□□□□ 0.89
TO15178 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TO15178 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TO15178 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TO15178 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TO15178 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TO15178 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TO15178 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TO15178 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.6■□□□□ 0.89
TO15178 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TO15178 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.6■□□□□ 0.89
TO15178 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TO15178 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.6■□□□□ 0.89
TO15178 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.6■□□□□ 0.89
TO15178 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.6■□□□□ 0.89
TO15178 AC009086.3-201ENST00000623486 1008 ntBASIC20.6■□□□□ 0.89
TO15178 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TO15178 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
TO15178 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TO15178 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.6■□□□□ 0.89
TO15178 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TO15178 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TO15178 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TO15178 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.59■□□□□ 0.89
TO15178 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.59■□□□□ 0.89
TO15178 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 DUX4L19-201ENST00000557448 1267 ntBASIC20.59■□□□□ 0.89
TO15178 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TO15178 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.59■□□□□ 0.89
TO15178 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TO15178 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.59■□□□□ 0.89
TO15178 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TO15178 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.58■□□□□ 0.89
TO15178 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.58■□□□□ 0.89
TO15178 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TO15178 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.58■□□□□ 0.89
TO15178 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TO15178 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TO15178 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.58■□□□□ 0.88
TO15178 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.58■□□□□ 0.88
TO15178 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms