Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK2O00526 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK2O00526 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.96■□□□□ 0.47
UPK2O00526 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPK2O00526 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK2O00526 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK2O00526 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK2O00526 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK2O00526 AL353803.4-201ENST00000565882 1934 ntBASIC17.96■□□□□ 0.47
UPK2O00526 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK2O00526 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
UPK2O00526 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UPK2O00526 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK2O00526 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK2O00526 ESRRAP2-201ENST00000418437 1549 ntBASIC17.95■□□□□ 0.46
UPK2O00526 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.95■□□□□ 0.46
UPK2O00526 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPK2O00526 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.95■□□□□ 0.46
UPK2O00526 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.95■□□□□ 0.46
UPK2O00526 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
UPK2O00526 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.95■□□□□ 0.46
UPK2O00526 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.95■□□□□ 0.46
UPK2O00526 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.95■□□□□ 0.46
UPK2O00526 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
UPK2O00526 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
UPK2O00526 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.95■□□□□ 0.46
UPK2O00526 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.95■□□□□ 0.46
UPK2O00526 GUSBP5-202ENST00000510805 1989 ntBASIC17.95■□□□□ 0.46
UPK2O00526 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK2O00526 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK2O00526 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.95■□□□□ 0.46
UPK2O00526 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK2O00526 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK2O00526 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.94■□□□□ 0.46
UPK2O00526 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK2O00526 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK2O00526 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK2O00526 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK2O00526 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK2O00526 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.94■□□□□ 0.46
UPK2O00526 AL031848.2-201ENST00000607670 837 ntBASIC17.94■□□□□ 0.46
UPK2O00526 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK2O00526 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
UPK2O00526 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK2O00526 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK2O00526 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.93■□□□□ 0.46
UPK2O00526 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.93■□□□□ 0.46
UPK2O00526 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
UPK2O00526 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.93■□□□□ 0.46
UPK2O00526 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
UPK2O00526 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK2O00526 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPK2O00526 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.92■□□□□ 0.46
UPK2O00526 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.92■□□□□ 0.46
UPK2O00526 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK2O00526 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.92■□□□□ 0.46
UPK2O00526 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK2O00526 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UPK2O00526 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.92■□□□□ 0.46
UPK2O00526 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK2O00526 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK2O00526 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK2O00526 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
UPK2O00526 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK2O00526 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK2O00526 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK2O00526 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
UPK2O00526 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK2O00526 ECEL1P1-201ENST00000373592 1742 ntBASIC17.91■□□□□ 0.46
UPK2O00526 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK2O00526 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
UPK2O00526 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
UPK2O00526 EP400NL-214ENST00000641289 2402 ntBASIC17.91■□□□□ 0.46
UPK2O00526 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK2O00526 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK2O00526 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UPK2O00526 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UPK2O00526 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UPK2O00526 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UPK2O00526 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK2O00526 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK2O00526 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPK2O00526 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK2O00526 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UPK2O00526 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UPK2O00526 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
UPK2O00526 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK2O00526 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK2O00526 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.9■□□□□ 0.46
UPK2O00526 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK2O00526 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK2O00526 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK2O00526 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK2O00526 AC144652.1-201ENST00000609974 1624 ntBASIC17.9■□□□□ 0.46
UPK2O00526 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPK2O00526 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK2O00526 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UPK2O00526 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK2O00526 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.89■□□□□ 0.45
UPK2O00526 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms