Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
AP3B1O00203 FP325331.1-202ENST00000623531 1380 ntBASIC22.63■■□□□ 1.21
AP3B1O00203 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.62■■□□□ 1.21
AP3B1O00203 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
AP3B1O00203 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.62■■□□□ 1.21
AP3B1O00203 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.62■■□□□ 1.21
AP3B1O00203 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
AP3B1O00203 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
AP3B1O00203 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.62■■□□□ 1.21
AP3B1O00203 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
AP3B1O00203 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.62■■□□□ 1.21
AP3B1O00203 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
AP3B1O00203 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
AP3B1O00203 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
AP3B1O00203 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.62■■□□□ 1.21
AP3B1O00203 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
AP3B1O00203 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
AP3B1O00203 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
AP3B1O00203 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
AP3B1O00203 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
AP3B1O00203 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
AP3B1O00203 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
AP3B1O00203 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
AP3B1O00203 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
AP3B1O00203 ESRRAP2-201ENST00000418437 1549 ntBASIC22.61■■□□□ 1.21
AP3B1O00203 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
AP3B1O00203 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.61■■□□□ 1.21
AP3B1O00203 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
AP3B1O00203 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
AP3B1O00203 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
AP3B1O00203 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
AP3B1O00203 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
AP3B1O00203 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
AP3B1O00203 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
AP3B1O00203 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
AP3B1O00203 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
AP3B1O00203 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
AP3B1O00203 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
AP3B1O00203 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.59■■□□□ 1.21
AP3B1O00203 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
AP3B1O00203 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
AP3B1O00203 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
AP3B1O00203 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.59■■□□□ 1.21
AP3B1O00203 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
AP3B1O00203 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
AP3B1O00203 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
AP3B1O00203 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
AP3B1O00203 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
AP3B1O00203 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
AP3B1O00203 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.58■■□□□ 1.21
AP3B1O00203 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.58■■□□□ 1.21
AP3B1O00203 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
AP3B1O00203 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
AP3B1O00203 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.58■■□□□ 1.21
AP3B1O00203 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
AP3B1O00203 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
AP3B1O00203 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.57■■□□□ 1.2
AP3B1O00203 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
AP3B1O00203 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
AP3B1O00203 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.57■■□□□ 1.2
AP3B1O00203 MTDHP2-201ENST00000601468 714 ntBASIC22.57■■□□□ 1.2
AP3B1O00203 MIR4787-201ENST00000607364 84 ntBASIC22.57■■□□□ 1.2
AP3B1O00203 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
AP3B1O00203 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
AP3B1O00203 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.57■■□□□ 1.2
AP3B1O00203 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
AP3B1O00203 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.57■■□□□ 1.2
AP3B1O00203 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.57■■□□□ 1.2
AP3B1O00203 LINC01529-204ENST00000636474 1715 ntBASIC22.57■■□□□ 1.2
AP3B1O00203 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
AP3B1O00203 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
AP3B1O00203 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
AP3B1O00203 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
AP3B1O00203 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.56■■□□□ 1.2
AP3B1O00203 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
AP3B1O00203 RARRES2P1-201ENST00000474487 481 ntBASIC22.56■■□□□ 1.2
AP3B1O00203 AC233723.2-201ENST00000623798 2106 ntBASIC22.56■■□□□ 1.2
AP3B1O00203 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.56■■□□□ 1.2
AP3B1O00203 AC079834.2-201ENST00000609776 1949 ntBASIC22.56■■□□□ 1.2
AP3B1O00203 AL117328.2-201ENST00000624617 1940 ntBASIC22.56■■□□□ 1.2
AP3B1O00203 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.56■■□□□ 1.2
AP3B1O00203 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
AP3B1O00203 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
AP3B1O00203 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.55■■□□□ 1.2
AP3B1O00203 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
AP3B1O00203 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
AP3B1O00203 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.55■■□□□ 1.2
AP3B1O00203 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.55■■□□□ 1.2
AP3B1O00203 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
AP3B1O00203 C1orf229-201ENST00000623686 2258 ntBASIC22.55■■□□□ 1.2
AP3B1O00203 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
AP3B1O00203 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
AP3B1O00203 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.54■■□□□ 1.2
AP3B1O00203 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
AP3B1O00203 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.54■■□□□ 1.2
AP3B1O00203 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.54■■□□□ 1.2
AP3B1O00203 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.54■■□□□ 1.2
AP3B1O00203 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.54■■□□□ 1.2
AP3B1O00203 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
AP3B1O00203 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms