Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM200CA6NKL6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM200CA6NKL6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 AC135279.3-201ENST00000610945 1311 ntBASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM200CA6NKL6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 AL031432.3-201ENST00000607698 485 ntBASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM200CA6NKL6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 AC005837.3-201ENST00000612163 286 ntBASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 AC009086.3-201ENST00000623486 1008 ntBASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM200CA6NKL6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 MIR3181-201ENST00000578512 73 ntBASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM200CA6NKL6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 AC144652.1-201ENST00000609974 1624 ntBASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 AL138724.1-201ENST00000606771 1088 ntBASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM200CA6NKL6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TMEM200CA6NKL6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 FP325331.1-202ENST00000623531 1380 ntBASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TMEM200CA6NKL6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM200CA6NKL6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
TMEM200CA6NKL6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM200CA6NKL6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TMEM200CA6NKL6 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM200CA6NKL6 AC011298.3-201ENST00000615796 283 ntBASIC20.69■□□□□ 0.9
TMEM200CA6NKL6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM200CA6NKL6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM200CA6NKL6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM200CA6NKL6 SUDS3P1-201ENST00000505831 966 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms