Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV5A0A0B4J249 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV5A0A0B4J249 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV5A0A0B4J249 AC079630.1-202ENST00000618127 1840 ntBASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 AC242852.2-201ENST00000615738 1807 ntBASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV5A0A0B4J249 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV5A0A0B4J249 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 AC011551.1-201ENST00000614101 683 ntBASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 ESRRAP2-201ENST00000418437 1549 ntBASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV5A0A0B4J249 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
TRAV5A0A0B4J249 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV5A0A0B4J249 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV5A0A0B4J249 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRAV5A0A0B4J249 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV5A0A0B4J249 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV5A0A0B4J249 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV5A0A0B4J249 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV5A0A0B4J249 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV5A0A0B4J249 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAV5A0A0B4J249 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV5A0A0B4J249 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV5A0A0B4J249 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV5A0A0B4J249 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV5A0A0B4J249 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV5A0A0B4J249 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV5A0A0B4J249 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV5A0A0B4J249 AC129492.7-201ENST00000622992 756 ntBASIC17.32■□□□□ 0.36
TRAV5A0A0B4J249 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV5A0A0B4J249 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRAV5A0A0B4J249 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV5A0A0B4J249 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms