Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
TRGV5A0A0B4J1U4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRGV5A0A0B4J1U4 AC144652.1-201ENST00000609974 1624 ntBASIC20.17■□□□□ 0.82
TRGV5A0A0B4J1U4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.17■□□□□ 0.82
TRGV5A0A0B4J1U4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.17■□□□□ 0.82
TRGV5A0A0B4J1U4 DUX4L4-201ENST00000566884 1269 ntBASIC20.17■□□□□ 0.82
TRGV5A0A0B4J1U4 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.17■□□□□ 0.82
TRGV5A0A0B4J1U4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRGV5A0A0B4J1U4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.17■□□□□ 0.82
TRGV5A0A0B4J1U4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 RARRES2P6-201ENST00000567333 442 ntBASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 AC133637.1-201ENST00000624115 1537 ntBASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 LINC01529-204ENST00000636474 1715 ntBASIC20.16■□□□□ 0.82
TRGV5A0A0B4J1U4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 AC126544.1-201ENST00000580842 1059 ntBASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 AL499627.2-201ENST00000606283 725 ntBASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 AC004812.2-201ENST00000611079 2094 ntBASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV5A0A0B4J1U4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRGV5A0A0B4J1U4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRGV5A0A0B4J1U4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.14■□□□□ 0.81
TRGV5A0A0B4J1U4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.14■□□□□ 0.81
TRGV5A0A0B4J1U4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.14■□□□□ 0.81
TRGV5A0A0B4J1U4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.14■□□□□ 0.81
TRGV5A0A0B4J1U4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRGV5A0A0B4J1U4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.14■□□□□ 0.81
TRGV5A0A0B4J1U4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV5A0A0B4J1U4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV5A0A0B4J1U4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV5A0A0B4J1U4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
TRGV5A0A0B4J1U4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV5A0A0B4J1U4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV5A0A0B4J1U4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 IRS3P-201ENST00000223076 1006 ntBASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 SLC47A1P1-202ENST00000449666 945 ntBASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV5A0A0B4J1U4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
TRGV5A0A0B4J1U4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms