Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 SLC25A24-204ENST00000569674 2357 ntBASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 DUX4L18-201ENST00000553347 1267 ntBASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 AL137060.1-201ENST00000618151 2648 ntBASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRBV6-7A0A0A0MS04 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 AC242852.2-201ENST00000615738 1807 ntBASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 ABHD17AP5-201ENST00000580133 923 ntBASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
TRBV6-7A0A0A0MS04 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 AC120024.1-201ENST00000562672 995 ntBASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 NTF6A-201ENST00000591175 560 ntBASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-7A0A0A0MS04 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRBV6-7A0A0A0MS04 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV6-7A0A0A0MS04 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 AC074183.2-201ENST00000623112 922 ntBASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 AF131216.4-201ENST00000638924 1588 ntBASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV6-7A0A0A0MS04 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms