Protein–RNA interactions for Protein: Q9P287

BCCIP, BRCA2 and CDKN1A-interacting protein, humanhuman

Known RBP eCLIP

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIPQ9P287 RPH3AL-207ENST00000572075 569 ntTSL 417.9■□□□□ 0.461e-7■■■■□ 25.4
BCCIPQ9P287 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.291e-7■■■■□ 25.4
BCCIPQ9P287 RPH3AL-205ENST00000570893 594 ntTSL 316.78■□□□□ 0.281e-7■■■■□ 25.4
BCCIPQ9P287 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.54■□□□□ 0.241e-7■■■■□ 25.4
BCCIPQ9P287 RPH3AL-219ENST00000576001 647 ntTSL 316.16■□□□□ 0.181e-7■■■■□ 25.4
BCCIPQ9P287 RPH3AL-206ENST00000570954 568 ntTSL 412.43□□□□□ -0.421e-7■■■■□ 25.4
BCCIPQ9P287 DOT1L-203ENST00000452696 624 ntTSL 315.48■□□□□ 0.079e-8■■■■□ 25.1
BCCIPQ9P287 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.029e-8■■■■□ 25.1
BCCIPQ9P287 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.059e-8■■■■□ 25.1
BCCIPQ9P287 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.01■■□□□ 1.112e-6■■■■□ 24.8
BCCIPQ9P287 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.66■■□□□ 1.062e-6■■■■□ 24.8
BCCIPQ9P287 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.792e-6■■■■□ 24.8
BCCIPQ9P287 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.32e-6■■■■□ 24.8
BCCIPQ9P287 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.472e-7■■■■□ 24.4
BCCIPQ9P287 AC018630.6-201ENST00000536668 1618 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.542e-7■■■■□ 24.4
BCCIPQ9P287 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.012e-7■■■■□ 24.4
BCCIPQ9P287 SF3B3-209ENST00000567635 630 ntTSL 57.22□□□□□ -1.252e-7■■■■□ 24.4
BCCIPQ9P287 PRH1-203ENST00000538332 675 ntAPPRIS ALT2 TSL 54.15□□□□□ -1.752e-7■■■■□ 24.4
BCCIPQ9P287 PEG3-203ENST00000594389 411 ntTSL 323.53■■□□□ 1.365e-7■■■■□ 24.3
BCCIPQ9P287 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.235e-7■■■■□ 24.3
BCCIPQ9P287 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.15e-7■■■■□ 24.3
BCCIPQ9P287 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.085e-7■■■■□ 24.3
BCCIPQ9P287 PEG3-204ENST00000594706 583 ntTSL 319.8■□□□□ 0.765e-7■■■■□ 24.3
BCCIPQ9P287 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.66■□□□□ 0.585e-7■■■■□ 24.3
BCCIPQ9P287 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)17.52■□□□□ 0.45e-7■■■■□ 24.3
BCCIPQ9P287 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC13.5□□□□□ -0.255e-7■■■■□ 24.3
BCCIPQ9P287 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.755e-7■■■■□ 24.3
BCCIPQ9P287 PEG3-205ENST00000596261 570 ntTSL 48.81□□□□□ -15e-7■■■■□ 24.3
BCCIPQ9P287 SHANK2-214ENST00000468619 2775 ntTSL 214.99□□□□□ -0.017e-7■■■■□ 24.2
BCCIPQ9P287 SHANK2-217ENST00000498519 510 ntTSL 314.58□□□□□ -0.087e-7■■■■□ 24.2
BCCIPQ9P287 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.892e-6■■■■□ 24.1
BCCIPQ9P287 LAMP1-203ENST00000472564 5242 ntTSL 219.65■□□□□ 0.742e-6■■■■□ 24.1
BCCIPQ9P287 snoU2-30.2-201ENST00000362805 70 ntBASIC1.79□□□□□ -2.125e-27■■■■□ 24.1
BCCIPQ9P287 SHANK2-215ENST00000470759 762 ntTSL 519.44■□□□□ 0.71e-6■■■■□ 23.9
BCCIPQ9P287 AXIN1-205ENST00000481769 1089 ntTSL 328.15■■■□□ 2.13e-7■■■■□ 23.8
BCCIPQ9P287 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.1■□□□□ 0.973e-7■■■■□ 23.8
BCCIPQ9P287 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.743e-7■■■■□ 23.8
BCCIPQ9P287 AXIN1-204ENST00000461023 6340 ntTSL 217.9■□□□□ 0.463e-7■■■■□ 23.8
BCCIPQ9P287 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.353e-7■■■■□ 23.8
BCCIPQ9P287 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.23e-7■■■■□ 23.8
BCCIPQ9P287 TRA2B-206ENST00000456380 1697 ntTSL 513.17□□□□□ -0.33e-7■■■■□ 23.8
BCCIPQ9P287 TRA2B-214ENST00000487615 4485 ntTSL 1 (best)13.07□□□□□ -0.323e-7■■■■□ 23.8
BCCIPQ9P287 TRA2B-208ENST00000465245 634 ntTSL 312.92□□□□□ -0.343e-7■■■■□ 23.8
BCCIPQ9P287 TRA2B-213ENST00000485530 839 ntTSL 212.36□□□□□ -0.433e-7■■■■□ 23.8
BCCIPQ9P287 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.793e-7■■■■□ 23.8
BCCIPQ9P287 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.93e-7■■■■□ 23.8
BCCIPQ9P287 TRA2B-211ENST00000477939 530 ntTSL 28.18□□□□□ -1.13e-7■■■■□ 23.8
BCCIPQ9P287 TRA2B-210ENST00000471134 724 ntTSL 53.75□□□□□ -1.813e-7■■■■□ 23.8
BCCIPQ9P287 AC026412.1-205ENST00000522848 1130 ntTSL 222.42■■□□□ 1.189e-7■■■■□ 23.7
BCCIPQ9P287 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.34■□□□□ 0.859e-7■■■■□ 23.7
BCCIPQ9P287 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.07■□□□□ 0.489e-7■■■■□ 23.7
BCCIPQ9P287 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.59■□□□□ 0.419e-7■■■■□ 23.7
BCCIPQ9P287 AC026412.1-204ENST00000507505 1009 ntTSL 1 (best)16.88■□□□□ 0.299e-7■■■■□ 23.7
BCCIPQ9P287 AC026412.1-206ENST00000502273 206 ntBASIC13.54□□□□□ -0.249e-7■■■■□ 23.7
BCCIPQ9P287 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.47■■□□□ 1.195e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.72■□□□□ 0.275e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.245e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-223ENST00000588516 1304 ntTSL 515.05■□□□□ -05e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-232ENST00000591579 144 ntTSL 1 (best)13.98□□□□□ -0.175e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-233ENST00000591989 233 ntTSL 312.94□□□□□ -0.345e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC10.8□□□□□ -0.685e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC10.2□□□□□ -0.785e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.825e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-218ENST00000587547 889 ntTSL 1 (best)8.9□□□□□ -0.985e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-211ENST00000585363 241 ntTSL 56.28□□□□□ -1.45e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-236ENST00000592846 484 ntTSL 46.05□□□□□ -1.445e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-231ENST00000590694 165 ntTSL 55.14□□□□□ -1.595e-9■■■■□ 23.6
BCCIPQ9P287 NEDD4L-212ENST00000585594 220 ntTSL 1 (best)2.58□□□□□ -25e-9■■■■□ 23.6
BCCIPQ9P287 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.11e-6■■■■□ 23.5
BCCIPQ9P287 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.411e-6■■■■□ 23.5
BCCIPQ9P287 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.111e-6■■■■□ 23.4
BCCIPQ9P287 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC9.15□□□□□ -0.943e-6■■■■□ 23.4
BCCIPQ9P287 NUTM2B-AS1-210ENST00000600376 510 ntTSL 34.77□□□□□ -1.653e-6■■■■□ 23.4
BCCIPQ9P287 LINC00969-277ENST00000626852 511 ntTSL 516.95■□□□□ 0.33e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.39□□□□□ -0.113e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC13.94□□□□□ -0.183e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-323ENST00000630197 783 ntTSL 513.81□□□□□ -0.23e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-301ENST00000628053 582 ntTSL 512.36□□□□□ -0.433e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-271ENST00000626566 521 ntTSL 512.33□□□□□ -0.443e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-220ENST00000455807 764 ntTSL 312.33□□□□□ -0.443e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-286ENST00000627297 708 ntTSL 5 BASIC12.13□□□□□ -0.473e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-223ENST00000594101 955 ntTSL 512.13□□□□□ -0.473e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-227ENST00000595086 704 ntTSL 511.92□□□□□ -0.53e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC11.85□□□□□ -0.513e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-226ENST00000594976 750 ntTSL 511.79□□□□□ -0.523e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-209ENST00000432194 503 ntTSL 511.76□□□□□ -0.533e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-237ENST00000599566 718 ntTSL 511.76□□□□□ -0.533e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-279ENST00000626872 649 ntTSL 511.47□□□□□ -0.573e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-298ENST00000627863 793 ntTSL 511.31□□□□□ -0.63e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-333ENST00000631037 451 ntTSL 511.31□□□□□ -0.63e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-329ENST00000630675 608 ntTSL 511.31□□□□□ -0.63e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-295ENST00000627689 409 ntTSL 511.15□□□□□ -0.623e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-255ENST00000625383 612 ntTSL 511.13□□□□□ -0.633e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-265ENST00000626093 229 ntTSL 511.08□□□□□ -0.643e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-314ENST00000628982 554 ntTSL 511□□□□□ -0.653e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-258ENST00000625665 496 ntTSL 5 BASIC10.98□□□□□ -0.653e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-228ENST00000595382 659 ntTSL 510.97□□□□□ -0.653e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-299ENST00000627993 633 ntTSL 510.88□□□□□ -0.673e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-316ENST00000629537 666 ntTSL 510.79□□□□□ -0.683e-7■■■■□ 23.3
BCCIPQ9P287 LINC00969-210ENST00000432601 732 ntTSL 510.67□□□□□ -0.73e-7■■■■□ 23.3
Retrieved 100 of 1,347 protein–RNA pairs in 385.8 ms