Protein–RNA interactions for Protein: Q03433

VPS71, Vacuolar protein sorting-associated protein 71, yeastyeast

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS71Q03433 TIM23YNR017W 669 nt8.59□□□□□ -1.03
VPS71Q03433 LYS4YDR234W 2082 nt8.58□□□□□ -1.04
VPS71Q03433 FUR4YBR021W 1902 nt8.58□□□□□ -1.04
VPS71Q03433 tL(GAG)GtL(GAG)G 82 nt8.57□□□□□ -1.04
VPS71Q03433 RRT5YFR032C 870 nt8.56□□□□□ -1.04
VPS71Q03433 DIC1YLR348C 897 nt8.56□□□□□ -1.04
VPS71Q03433 PRE6YOL038W 765 nt8.55□□□□□ -1.04
VPS71Q03433 YLR179CYLR179C 606 nt8.53□□□□□ -1.04
VPS71Q03433 AAC1YMR056C 930 nt8.53□□□□□ -1.04
VPS71Q03433 BIO4YNR057C 714 nt8.53□□□□□ -1.04
VPS71Q03433 PRP4YPR178W 1398 nt8.52□□□□□ -1.05
VPS71Q03433 YPR064WYPR064W 420 nt8.51□□□□□ -1.05
VPS71Q03433 SIM1YIL123W 1431 nt8.51□□□□□ -1.05
VPS71Q03433 PCM1YEL058W 1674 nt8.5□□□□□ -1.05
VPS71Q03433 SNF6YHL025W 999 nt8.5□□□□□ -1.05
VPS71Q03433 DPS1YLL018C 1674 nt8.47□□□□□ -1.05
VPS71Q03433 TAD3YLR316C 969 nt8.47□□□□□ -1.05
VPS71Q03433 RNQ1YCL028W 1218 nt8.45□□□□□ -1.06
VPS71Q03433 WSC2YNL283C 1512 nt8.44□□□□□ -1.06
VPS71Q03433 YIH1YCR059C 777 nt8.43□□□□□ -1.06
VPS71Q03433 AHT1YHR093W 549 nt8.43□□□□□ -1.06
VPS71Q03433 YFL066CYFL066C 1179 nt8.42□□□□□ -1.06
VPS71Q03433 BIO5YNR056C 1686 nt8.42□□□□□ -1.06
VPS71Q03433 BMT6YLR063W 1098 nt8.4□□□□□ -1.06
VPS71Q03433 PBP1YGR178C 2169 nt8.39□□□□□ -1.07
VPS71Q03433 CYT2YKL087C 675 nt8.39□□□□□ -1.07
VPS71Q03433 CMP2YML057W 1815 nt8.37□□□□□ -1.07
VPS71Q03433 CCA1YER168C 1641 nt8.36□□□□□ -1.07
VPS71Q03433 YHR056W-AYHR056W-A 435 nt8.36□□□□□ -1.07
VPS71Q03433 PEX25YPL112C 1185 nt8.36□□□□□ -1.07
VPS71Q03433 SNF1YDR477W 1902 nt8.35□□□□□ -1.07
VPS71Q03433 YLL053CYLL053C 459 nt8.34□□□□□ -1.07
VPS71Q03433 NAT4YMR069W 858 nt8.34□□□□□ -1.07
VPS71Q03433 YKR005CYKR005C 1578 nt8.33□□□□□ -1.08
VPS71Q03433 YSP3YOR003W 1437 nt8.31□□□□□ -1.08
VPS71Q03433 BDH1YAL060W 1149 nt8.31□□□□□ -1.08
VPS71Q03433 ERF2YLR246W 1080 nt8.31□□□□□ -1.08
VPS71Q03433 AQY1YPR192W 918 nt8.31□□□□□ -1.08
VPS71Q03433 FTR1YER145C 1215 nt8.3□□□□□ -1.08
VPS71Q03433 YNL115CYNL115C 1935 nt8.3□□□□□ -1.08
VPS71Q03433 CRR1YLR213C 1269 nt8.29□□□□□ -1.08
VPS71Q03433 RAX1YOR301W 1308 nt8.29□□□□□ -1.08
VPS71Q03433 GAL1YBR020W 1587 nt8.28□□□□□ -1.08
VPS71Q03433 YLR415CYLR415C 339 nt8.27□□□□□ -1.09
VPS71Q03433 HSL7YBR133C 2484 nt8.26□□□□□ -1.09
VPS71Q03433 TRM5YHR070W 1500 nt8.25□□□□□ -1.09
VPS71Q03433 MSF1YPR047W 1410 nt8.25□□□□□ -1.09
VPS71Q03433 HEM12YDR047W 1089 nt8.23□□□□□ -1.09
VPS71Q03433 IRC24YIR036C 792 nt8.23□□□□□ -1.09
VPS71Q03433 STB1YNL309W 1263 nt8.23□□□□□ -1.09
VPS71Q03433 CCT4YDL143W 1587 nt8.22□□□□□ -1.09
VPS71Q03433 SPC25YER018C 666 nt8.22□□□□□ -1.09
VPS71Q03433 THI74YDR438W 1113 nt8.21□□□□□ -1.1
VPS71Q03433 YGR259CYGR259C 441 nt8.21□□□□□ -1.1
VPS71Q03433 MIR1YJR077C 936 nt8.21□□□□□ -1.1
VPS71Q03433 MIC10YCL057C-A 294 nt8.21□□□□□ -1.1
VPS71Q03433 YDR524C-BYDR524C-B 201 nt8.19□□□□□ -1.1
VPS71Q03433 DDR2YOL052C-A 186 nt8.18□□□□□ -1.1
VPS71Q03433 GPI16YHR188C 1833 nt8.17□□□□□ -1.1
VPS71Q03433 YMR244WYMR244W 1068 nt8.17□□□□□ -1.1
VPS71Q03433 VPS75YNL246W 795 nt8.17□□□□□ -1.1
VPS71Q03433 SWC5YBR231C 912 nt8.17□□□□□ -1.1
VPS71Q03433 ATF2YGR177C 1608 nt8.17□□□□□ -1.1
VPS71Q03433 VPS60YDR486C 690 nt8.16□□□□□ -1.1
VPS71Q03433 YAT1YAR035W 2064 nt8.15□□□□□ -1.1
VPS71Q03433 NDI1YML120C 1542 nt8.15□□□□□ -1.1
VPS71Q03433 YFL067WYFL067W 528 nt8.15□□□□□ -1.1
VPS71Q03433 SNG1YGR197C 1644 nt8.14□□□□□ -1.11
VPS71Q03433 YCL074WYCL074W 927 nt8.14□□□□□ -1.11
VPS71Q03433 YDL086C-AYDL086C-A 435 nt8.13□□□□□ -1.11
VPS71Q03433 ALG3YBL082C 1377 nt8.12□□□□□ -1.11
VPS71Q03433 DUS1YML080W 1272 nt8.12□□□□□ -1.11
VPS71Q03433 DAT1YML113W 747 nt8.11□□□□□ -1.11
VPS71Q03433 FEN2YCR028C 1539 nt8.11□□□□□ -1.11
VPS71Q03433 RDN25-1RDN25-1 3396 nt8.08□□□□□ -1.12
VPS71Q03433 RDN25-2RDN25-2 3396 nt8.08□□□□□ -1.12
VPS71Q03433 GLR1YPL091W 1452 nt8.08□□□□□ -1.12
VPS71Q03433 ANP1YEL036C 1503 nt8.08□□□□□ -1.12
VPS71Q03433 PAU7YAR020C 168 nt8.07□□□□□ -1.12
VPS71Q03433 HEL2YDR266C 1920 nt8.06□□□□□ -1.12
VPS71Q03433 AGP1YCL025C 1902 nt8.06□□□□□ -1.12
VPS71Q03433 YGL034CYGL034C 366 nt8.06□□□□□ -1.12
VPS71Q03433 BNA2YJR078W 1362 nt8.05□□□□□ -1.12
VPS71Q03433 FRE6YLL051C 2139 nt8.05□□□□□ -1.12
VPS71Q03433 UBA4YHR111W 1323 nt8.03□□□□□ -1.12
VPS71Q03433 SPT20YOL148C 1815 nt8.03□□□□□ -1.12
VPS71Q03433 YIR016WYIR016W 798 nt8.03□□□□□ -1.12
VPS71Q03433 SSN3YPL042C 1668 nt8.02□□□□□ -1.13
VPS71Q03433 TIM17YJL143W 477 nt8.01□□□□□ -1.13
VPS71Q03433 RBG2YGR173W 1107 nt8□□□□□ -1.13
VPS71Q03433 SHB17YKR043C 816 nt7.99□□□□□ -1.13
VPS71Q03433 MIC12YBR262C 321 nt7.99□□□□□ -1.13
VPS71Q03433 YSR3YKR053C 1215 nt7.98□□□□□ -1.13
VPS71Q03433 XYL2YLR070C 1071 nt7.97□□□□□ -1.13
VPS71Q03433 RBG1YAL036C 1110 nt7.96□□□□□ -1.14
VPS71Q03433 SHM2YLR058C 1410 nt7.95□□□□□ -1.14
VPS71Q03433 RDN18-1RDN18-1 1800 nt7.94□□□□□ -1.14
VPS71Q03433 RDN18-2RDN18-2 1800 nt7.94□□□□□ -1.14
VPS71Q03433 HHO1YPL127C 777 nt7.94□□□□□ -1.14
VPS71Q03433 YDR010CYDR010C 333 nt7.93□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 3536.5 ms