Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 IRC14YOR135C 342 nt13.46□□□□□ -0.25
RIM101P33400 YNL303WYNL303W 348 nt13.45□□□□□ -0.26
RIM101P33400 NUF2YOL069W 1356 nt13.45□□□□□ -0.26
RIM101P33400 GAT1YFL021W 1533 nt13.44□□□□□ -0.26
RIM101P33400 PST2YDR032C 597 nt13.43□□□□□ -0.26
RIM101P33400 OSW1YOR255W 837 nt13.43□□□□□ -0.26
RIM101P33400 CTR1YPR124W 1221 nt13.42□□□□□ -0.26
RIM101P33400 YSP3YOR003W 1437 nt13.41□□□□□ -0.26
RIM101P33400 YNL319WYNL319W 441 nt13.4□□□□□ -0.26
RIM101P33400 COA2YPL189C-A 207 nt13.4□□□□□ -0.26
RIM101P33400 MEP2YNL142W 1500 nt13.39□□□□□ -0.27
RIM101P33400 SWP1YMR149W 861 nt13.39□□□□□ -0.27
RIM101P33400 SHR5YOL110W 714 nt13.37□□□□□ -0.27
RIM101P33400 snR189snR189 189 nt13.37□□□□□ -0.27
RIM101P33400 YDR008CYDR008C 351 nt13.35□□□□□ -0.27
RIM101P33400 MMS21YEL019C 804 nt13.35□□□□□ -0.27
RIM101P33400 CUS2YNL286W 858 nt13.35□□□□□ -0.27
RIM101P33400 SKI6YGR195W 741 nt13.34□□□□□ -0.27
RIM101P33400 MRS3YJL133W 945 nt13.34□□□□□ -0.27
RIM101P33400 YLR283WYLR283W 945 nt13.33□□□□□ -0.28
RIM101P33400 MCT1YOR221C 1083 nt13.33□□□□□ -0.28
RIM101P33400 MAF1YDR005C 1188 nt13.32□□□□□ -0.28
RIM101P33400 PZF1YPR186C 1290 nt13.31□□□□□ -0.28
RIM101P33400 RER1YCL001W 567 nt13.3□□□□□ -0.28
RIM101P33400 DEP1YAL013W 1218 nt13.29□□□□□ -0.28
RIM101P33400 RRP1YDR087C 837 nt13.28□□□□□ -0.28
RIM101P33400 YMR114CYMR114C 1107 nt13.26□□□□□ -0.29
RIM101P33400 ERG12YMR208W 1332 nt13.25□□□□□ -0.29
RIM101P33400 YGR283CYGR283C 1026 nt13.25□□□□□ -0.29
RIM101P33400 PEX12YMR026C 1200 nt13.25□□□□□ -0.29
RIM101P33400 SIR2YDL042C 1689 nt13.24□□□□□ -0.29
RIM101P33400 PTC2YER089C 1395 nt13.23□□□□□ -0.29
RIM101P33400 LYS12YIL094C 1116 nt13.22□□□□□ -0.29
RIM101P33400 RNQ1YCL028W 1218 nt13.22□□□□□ -0.29
RIM101P33400 DLD2YDL178W 1593 nt13.22□□□□□ -0.29
RIM101P33400 DCW1YKL046C 1350 nt13.21□□□□□ -0.29
RIM101P33400 YER147C-AYER147C-A 411 nt13.21□□□□□ -0.29
RIM101P33400 ERG29YMR134W 714 nt13.2□□□□□ -0.3
RIM101P33400 NUR1YDL089W 1455 nt13.2□□□□□ -0.3
RIM101P33400 NAB2YGL122C 1578 nt13.19□□□□□ -0.3
RIM101P33400 PCL6YER059W 1263 nt13.18□□□□□ -0.3
RIM101P33400 HAT2YEL056W 1206 nt13.17□□□□□ -0.3
RIM101P33400 EEB1YPL095C 1371 nt13.17□□□□□ -0.3
RIM101P33400 YHR028W-AYHR028W-A 321 nt13.16□□□□□ -0.3
RIM101P33400 PUN1YLR414C 792 nt13.16□□□□□ -0.3
RIM101P33400 MIX17YMR002W 471 nt13.16□□□□□ -0.3
RIM101P33400 YGR168CYGR168C 1131 nt13.15□□□□□ -0.3
RIM101P33400 GAR1YHR089C 618 nt13.15□□□□□ -0.3
RIM101P33400 YLR169WYLR169W 354 nt13.15□□□□□ -0.3
RIM101P33400 OAZ1YPL052W 879 nt13.15□□□□□ -0.3
RIM101P33400 snR34snR34 203 nt13.15□□□□□ -0.3
RIM101P33400 YJL211CYJL211C 444 nt13.14□□□□□ -0.31
RIM101P33400 YBR220CYBR220C 1683 nt13.14□□□□□ -0.31
RIM101P33400 KDX1YKL161C 1302 nt13.13□□□□□ -0.31
RIM101P33400 YKL097CYKL097C 411 nt13.13□□□□□ -0.31
RIM101P33400 HAT1YPL001W 1125 nt13.13□□□□□ -0.31
RIM101P33400 YEL050W-AYEL050W-A 192 nt13.12□□□□□ -0.31
RIM101P33400 BUD16YEL029C 939 nt13.11□□□□□ -0.31
RIM101P33400 YPR150WYPR150W 522 nt13.11□□□□□ -0.31
RIM101P33400 YBR292CYBR292C 372 nt13.11□□□□□ -0.31
RIM101P33400 SUT1YGL162W 900 nt13.08□□□□□ -0.32
RIM101P33400 RSF1YMR030W 1131 nt13.07□□□□□ -0.32
RIM101P33400 RRS1YOR294W 612 nt13.06□□□□□ -0.32
RIM101P33400 PEX22YAL055W 543 nt13.05□□□□□ -0.32
RIM101P33400 RCE1YMR274C 948 nt13.05□□□□□ -0.32
RIM101P33400 ARC35YNR035C 1029 nt13.05□□□□□ -0.32
RIM101P33400 DSE3YOR264W 1293 nt13.05□□□□□ -0.32
RIM101P33400 SVF1YDR346C 1446 nt13.05□□□□□ -0.32
RIM101P33400 RAI1YGL246C 1164 nt13.04□□□□□ -0.32
RIM101P33400 DAL2YIR029W 1032 nt13.04□□□□□ -0.32
RIM101P33400 NMD4YLR363C 657 nt13.04□□□□□ -0.32
RIM101P33400 CWC25YNL245C 540 nt13.04□□□□□ -0.32
RIM101P33400 RTG3YBL103C 1461 nt13.04□□□□□ -0.32
RIM101P33400 RPN10YHR200W 807 nt13.03□□□□□ -0.32
RIM101P33400 CTK2YJL006C 972 nt13.03□□□□□ -0.32
RIM101P33400 OCA1YNL099C 717 nt13.03□□□□□ -0.32
RIM101P33400 PRE2YPR103W 864 nt13.03□□□□□ -0.32
RIM101P33400 HMRA1YCR097W 381 nt13.02□□□□□ -0.33
RIM101P33400 FIS1YIL065C 468 nt13.02□□□□□ -0.33
RIM101P33400 YNL165WYNL165W 1221 nt13.01□□□□□ -0.33
RIM101P33400 RAD17YOR368W 1206 nt13□□□□□ -0.33
RIM101P33400 FPS1YLL043W 2010 nt13□□□□□ -0.33
RIM101P33400 ALG7YBR243C 1347 nt12.99□□□□□ -0.33
RIM101P33400 KRE28YDR532C 1158 nt12.99□□□□□ -0.33
RIM101P33400 YIF1YNL263C 945 nt12.98□□□□□ -0.33
RIM101P33400 VAM3YOR106W 852 nt12.98□□□□□ -0.33
RIM101P33400 TGS1YPL157W 948 nt12.97□□□□□ -0.33
RIM101P33400 RRP17YDR412W 708 nt12.95□□□□□ -0.34
RIM101P33400 JJJ3YJR097W 519 nt12.95□□□□□ -0.34
RIM101P33400 EMI2YDR516C 1503 nt12.93□□□□□ -0.34
RIM101P33400 YEA4YEL004W 1029 nt12.93□□□□□ -0.34
RIM101P33400 YKR104WYKR104W 921 nt12.93□□□□□ -0.34
RIM101P33400 YLR198CYLR198C 360 nt12.93□□□□□ -0.34
RIM101P33400 YLR412C-AYLR412C-A 207 nt12.93□□□□□ -0.34
RIM101P33400 YNL208WYNL208W 600 nt12.93□□□□□ -0.34
RIM101P33400 MER1YNL210W 813 nt12.93□□□□□ -0.34
RIM101P33400 YHR022CYHR022C 771 nt12.92□□□□□ -0.34
RIM101P33400 MHO1YJR008W 1017 nt12.92□□□□□ -0.34
RIM101P33400 DSC2YOL073C 969 nt12.92□□□□□ -0.34
RIM101P33400 CBS1YDL069C 690 nt12.91□□□□□ -0.34
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms