Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 YDL157CYDL157C 357 nt10.25□□□□□ -0.77
TY1A-LR1P0CX68 PUS5YLR165C 765 nt10.25□□□□□ -0.77
TY1A-LR1P0CX68 NEJ1YLR265C 1029 nt10.25□□□□□ -0.77
TY1A-LR1P0CX68 YLR311CYLR311C 348 nt10.25□□□□□ -0.77
TY1A-LR1P0CX68 ATG17YLR423C 1254 nt10.25□□□□□ -0.77
TY1A-LR1P0CX68 RUF21RUF21 707 nt10.25□□□□□ -0.77
TY1A-LR1P0CX68 BOP3YNL042W 1191 nt10.25□□□□□ -0.77
TY1A-LR1P0CX68 YPR1YDR368W 939 nt10.24□□□□□ -0.77
TY1A-LR1P0CX68 VPS28YPL065W 729 nt10.24□□□□□ -0.77
TY1A-LR1P0CX68 FHN1YGR131W 525 nt10.23□□□□□ -0.77
TY1A-LR1P0CX68 DIA1YMR316W 1011 nt10.23□□□□□ -0.77
TY1A-LR1P0CX68 SIS1YNL007C 1059 nt10.23□□□□□ -0.77
TY1A-LR1P0CX68 GFD2YCL036W 1701 nt10.22□□□□□ -0.77
TY1A-LR1P0CX68 COX16YJL003W 357 nt10.22□□□□□ -0.77
TY1A-LR1P0CX68 TSR2YLR435W 618 nt10.22□□□□□ -0.77
TY1A-LR1P0CX68 ALF1YNL148C 765 nt10.22□□□□□ -0.77
TY1A-LR1P0CX68 YNL040WYNL040W 1371 nt10.22□□□□□ -0.77
TY1A-LR1P0CX68 SUA5YGL169W 1281 nt10.21□□□□□ -0.77
TY1A-LR1P0CX68 YHR054CYHR054C 1065 nt10.2□□□□□ -0.78
TY1A-LR1P0CX68 FAF1YIL019W 1041 nt10.2□□□□□ -0.78
TY1A-LR1P0CX68 BOR1YNL275W 1731 nt10.19□□□□□ -0.78
TY1A-LR1P0CX68 SCO2YBR024W 906 nt10.19□□□□□ -0.78
TY1A-LR1P0CX68 NCP1YHR042W 2076 nt10.18□□□□□ -0.78
TY1A-LR1P0CX68 GET2YER083C 858 nt10.18□□□□□ -0.78
TY1A-LR1P0CX68 BDH2YAL061W 1254 nt10.18□□□□□ -0.78
TY1A-LR1P0CX68 RTS2YOR077W 699 nt10.18□□□□□ -0.78
TY1A-LR1P0CX68 AME1YBR211C 975 nt10.18□□□□□ -0.78
TY1A-LR1P0CX68 ART5YGR068C 1761 nt10.18□□□□□ -0.78
TY1A-LR1P0CX68 PEX34YCL056C 435 nt10.17□□□□□ -0.78
TY1A-LR1P0CX68 YMR119W-AYMR119W-A 375 nt10.15□□□□□ -0.78
TY1A-LR1P0CX68 NDJ1YOL104C 1059 nt10.15□□□□□ -0.78
TY1A-LR1P0CX68 PCL10YGL134W 1302 nt10.12□□□□□ -0.79
TY1A-LR1P0CX68 RSA3YLR221C 663 nt10.12□□□□□ -0.79
TY1A-LR1P0CX68 YMR074CYMR074C 438 nt10.12□□□□□ -0.79
TY1A-LR1P0CX68 YJL225CYJL225C 5277 nt10.12□□□□□ -0.79
TY1A-LR1P0CX68 TAF4YMR005W 1167 nt10.11□□□□□ -0.79
TY1A-LR1P0CX68 AQY1YPR192W 918 nt10.11□□□□□ -0.79
TY1A-LR1P0CX68 YGR011WYGR011W 327 nt10.1□□□□□ -0.79
TY1A-LR1P0CX68 TAZ1YPR140W 1146 nt10.1□□□□□ -0.79
TY1A-LR1P0CX68 GAT1YFL021W 1533 nt10.09□□□□□ -0.79
TY1A-LR1P0CX68 CCT6YDR188W 1641 nt10.09□□□□□ -0.79
TY1A-LR1P0CX68 TRM9YML014W 840 nt10.09□□□□□ -0.79
TY1A-LR1P0CX68 YDL158CYDL158C 309 nt10.07□□□□□ -0.8
TY1A-LR1P0CX68 TIF34YMR146C 1044 nt10.07□□□□□ -0.8
TY1A-LR1P0CX68 SWP1YMR149W 861 nt10.07□□□□□ -0.8
TY1A-LR1P0CX68 YJR056CYJR056C 711 nt10.06□□□□□ -0.8
TY1A-LR1P0CX68 MCH5YOR306C 1566 nt10.05□□□□□ -0.8
TY1A-LR1P0CX68 SPT8YLR055C 1809 nt10.05□□□□□ -0.8
TY1A-LR1P0CX68 LIP2YLR239C 987 nt10.05□□□□□ -0.8
TY1A-LR1P0CX68 CUE1YMR264W 612 nt10.05□□□□□ -0.8
TY1A-LR1P0CX68 MRI1YPR118W 1236 nt10.05□□□□□ -0.8
TY1A-LR1P0CX68 CTR1YPR124W 1221 nt10.05□□□□□ -0.8
TY1A-LR1P0CX68 YFL054CYFL054C 1941 nt10.04□□□□□ -0.8
TY1A-LR1P0CX68 YSP3YOR003W 1437 nt10.02□□□□□ -0.81
TY1A-LR1P0CX68 RSB1YOR049C 1065 nt10.02□□□□□ -0.81
TY1A-LR1P0CX68 SLX1YBR228W 915 nt10.01□□□□□ -0.81
TY1A-LR1P0CX68 MRS3YJL133W 945 nt10□□□□□ -0.81
TY1A-LR1P0CX68 SUT2YPR009W 807 nt10□□□□□ -0.81
TY1A-LR1P0CX68 PET9YBL030C 957 nt9.99□□□□□ -0.81
TY1A-LR1P0CX68 COA2YPL189C-A 207 nt9.99□□□□□ -0.81
TY1A-LR1P0CX68 ECM9YKR004C 1134 nt9.98□□□□□ -0.81
TY1A-LR1P0CX68 MSA2YKR077W 1092 nt9.98□□□□□ -0.81
TY1A-LR1P0CX68 PRM4YPL156C 855 nt9.98□□□□□ -0.81
TY1A-LR1P0CX68 MMS21YEL019C 804 nt9.97□□□□□ -0.81
TY1A-LR1P0CX68 CSI1YMR025W 888 nt9.97□□□□□ -0.81
TY1A-LR1P0CX68 RRP1YDR087C 837 nt9.96□□□□□ -0.82
TY1A-LR1P0CX68 YNL195CYNL195C 786 nt9.95□□□□□ -0.82
TY1A-LR1P0CX68 YNL303WYNL303W 348 nt9.95□□□□□ -0.82
TY1A-LR1P0CX68 YNL319WYNL319W 441 nt9.94□□□□□ -0.82
TY1A-LR1P0CX68 YOL107WYOL107W 1029 nt9.94□□□□□ -0.82
TY1A-LR1P0CX68 ZTA1YBR046C 1005 nt9.94□□□□□ -0.82
TY1A-LR1P0CX68 SIR2YDL042C 1689 nt9.93□□□□□ -0.82
TY1A-LR1P0CX68 SUF2tP(AGG)C 72 nt9.93□□□□□ -0.82
TY1A-LR1P0CX68 SUF10tP(AGG)N 72 nt9.93□□□□□ -0.82
TY1A-LR1P0CX68 IDI1YPL117C 867 nt9.93□□□□□ -0.82
TY1A-LR1P0CX68 ALG12YNR030W 1656 nt9.93□□□□□ -0.82
TY1A-LR1P0CX68 PUS9YDL036C 1389 nt9.92□□□□□ -0.82
TY1A-LR1P0CX68 EEB1YPL095C 1371 nt9.92□□□□□ -0.82
TY1A-LR1P0CX68 HSP60YLR259C 1719 nt9.91□□□□□ -0.82
TY1A-LR1P0CX68 MAF1YDR005C 1188 nt9.91□□□□□ -0.82
TY1A-LR1P0CX68 YJL211CYJL211C 444 nt9.91□□□□□ -0.82
TY1A-LR1P0CX68 YLR283WYLR283W 945 nt9.91□□□□□ -0.82
TY1A-LR1P0CX68 OSW1YOR255W 837 nt9.91□□□□□ -0.82
TY1A-LR1P0CX68 PEX12YMR026C 1200 nt9.89□□□□□ -0.83
TY1A-LR1P0CX68 YMR114CYMR114C 1107 nt9.89□□□□□ -0.83
TY1A-LR1P0CX68 snR189snR189 189 nt9.89□□□□□ -0.83
TY1A-LR1P0CX68 HAS1YMR290C 1518 nt9.88□□□□□ -0.83
TY1A-LR1P0CX68 YER147C-AYER147C-A 411 nt9.88□□□□□ -0.83
TY1A-LR1P0CX68 LYS12YIL094C 1116 nt9.88□□□□□ -0.83
TY1A-LR1P0CX68 ATS1YAL020C 1002 nt9.88□□□□□ -0.83
TY1A-LR1P0CX68 MIX17YMR002W 471 nt9.88□□□□□ -0.83
TY1A-LR1P0CX68 KDX1YKL161C 1302 nt9.87□□□□□ -0.83
TY1A-LR1P0CX68 LSM3YLR438C-A 270 nt9.87□□□□□ -0.83
TY1A-LR1P0CX68 IRC14YOR135C 342 nt9.86□□□□□ -0.83
TY1A-LR1P0CX68 WWM1YFL010C 636 nt9.85□□□□□ -0.83
TY1A-LR1P0CX68 RPM1RPM1 483 nt9.85□□□□□ -0.83
TY1A-LR1P0CX68 NUF2YOL069W 1356 nt9.85□□□□□ -0.83
TY1A-LR1P0CX68 TIR4YOR009W 1464 nt9.85□□□□□ -0.83
TY1A-LR1P0CX68 RER1YCL001W 567 nt9.84□□□□□ -0.83
TY1A-LR1P0CX68 YIL100WYIL100W 354 nt9.83□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms