Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV8-4A0A0B4J246 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV8-4A0A0B4J246 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-4A0A0B4J246 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRAV8-4A0A0B4J246 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV8-4A0A0B4J246 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV8-4A0A0B4J246 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-4A0A0B4J246 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-4A0A0B4J246 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV8-4A0A0B4J246 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRAV8-4A0A0B4J246 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV8-4A0A0B4J246 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-4A0A0B4J246 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV8-4A0A0B4J246 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-4A0A0B4J246 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-4A0A0B4J246 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV8-4A0A0B4J246 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-4A0A0B4J246 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-4A0A0B4J246 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV8-4A0A0B4J246 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV8-4A0A0B4J246 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19■□□□□ 0.63
TRAV8-4A0A0B4J246 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV8-4A0A0B4J246 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV8-4A0A0B4J246 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV8-4A0A0B4J246 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV8-4A0A0B4J246 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-4A0A0B4J246 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-4A0A0B4J246 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV8-4A0A0B4J246 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV8-4A0A0B4J246 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV8-4A0A0B4J246 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV8-4A0A0B4J246 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV8-4A0A0B4J246 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV8-4A0A0B4J246 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV8-4A0A0B4J246 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV8-4A0A0B4J246 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV8-4A0A0B4J246 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV8-4A0A0B4J246 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV8-4A0A0B4J246 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV8-4A0A0B4J246 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV8-4A0A0B4J246 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV8-4A0A0B4J246 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV8-4A0A0B4J246 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV8-4A0A0B4J246 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV8-4A0A0B4J246 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV8-4A0A0B4J246 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-4A0A0B4J246 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-4A0A0B4J246 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV8-4A0A0B4J246 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAV8-4A0A0B4J246 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-4A0A0B4J246 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV8-4A0A0B4J246 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-4A0A0B4J246 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-4A0A0B4J246 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-4A0A0B4J246 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-4A0A0B4J246 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAV8-4A0A0B4J246 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV8-4A0A0B4J246 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.85■□□□□ 0.61
TRAV8-4A0A0B4J246 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRAV8-4A0A0B4J246 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV8-4A0A0B4J246 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-4A0A0B4J246 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-4A0A0B4J246 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-4A0A0B4J246 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.83■□□□□ 0.6
TRAV8-4A0A0B4J246 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV8-4A0A0B4J246 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV8-4A0A0B4J246 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-4A0A0B4J246 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-4A0A0B4J246 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-4A0A0B4J246 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-4A0A0B4J246 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.81■□□□□ 0.6
TRAV8-4A0A0B4J246 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-4A0A0B4J246 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRAV8-4A0A0B4J246 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-4A0A0B4J246 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-4A0A0B4J246 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV8-4A0A0B4J246 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV8-4A0A0B4J246 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAV8-4A0A0B4J246 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRAV8-4A0A0B4J246 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV8-4A0A0B4J246 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-4A0A0B4J246 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TRAV8-4A0A0B4J246 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-4A0A0B4J246 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV8-4A0A0B4J246 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-4A0A0B4J246 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-4A0A0B4J246 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-4A0A0B4J246 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TRAV8-4A0A0B4J246 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV8-4A0A0B4J246 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV8-4A0A0B4J246 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
TRAV8-4A0A0B4J246 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV8-4A0A0B4J246 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV8-4A0A0B4J246 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-4A0A0B4J246 DYNLL1-208ENST00000550178 581 ntBASIC18.73■□□□□ 0.59
TRAV8-4A0A0B4J246 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-4A0A0B4J246 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-4A0A0B4J246 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-4A0A0B4J246 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRAV8-4A0A0B4J246 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms