Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRAV16A0A0A6YYK6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV16A0A0A6YYK6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV16A0A0A6YYK6 AC006077.2-201ENST00000623591 457 ntBASIC19.13■□□□□ 0.65
TRAV16A0A0A6YYK6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV16A0A0A6YYK6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRAV16A0A0A6YYK6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV16A0A0A6YYK6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV16A0A0A6YYK6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV16A0A0A6YYK6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV16A0A0A6YYK6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV16A0A0A6YYK6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV16A0A0A6YYK6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV16A0A0A6YYK6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV16A0A0A6YYK6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV16A0A0A6YYK6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV16A0A0A6YYK6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV16A0A0A6YYK6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV16A0A0A6YYK6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV16A0A0A6YYK6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV16A0A0A6YYK6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV16A0A0A6YYK6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV16A0A0A6YYK6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV16A0A0A6YYK6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV16A0A0A6YYK6 ZNRF2P1-201ENST00000441407 443 ntBASIC19■□□□□ 0.63
TRAV16A0A0A6YYK6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV16A0A0A6YYK6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV16A0A0A6YYK6 AC145285.7-201ENST00000614819 1539 ntBASIC19■□□□□ 0.63
TRAV16A0A0A6YYK6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV16A0A0A6YYK6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV16A0A0A6YYK6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV16A0A0A6YYK6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
TRAV16A0A0A6YYK6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV16A0A0A6YYK6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV16A0A0A6YYK6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV16A0A0A6YYK6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV16A0A0A6YYK6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV16A0A0A6YYK6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV16A0A0A6YYK6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV16A0A0A6YYK6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV16A0A0A6YYK6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRAV16A0A0A6YYK6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV16A0A0A6YYK6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV16A0A0A6YYK6 AC139426.1-201ENST00000568218 2529 ntBASIC18.94■□□□□ 0.62
TRAV16A0A0A6YYK6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV16A0A0A6YYK6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV16A0A0A6YYK6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV16A0A0A6YYK6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV16A0A0A6YYK6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV16A0A0A6YYK6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV16A0A0A6YYK6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV16A0A0A6YYK6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV16A0A0A6YYK6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRAV16A0A0A6YYK6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV16A0A0A6YYK6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV16A0A0A6YYK6 ABCB10P3-201ENST00000561950 2166 ntBASIC18.88■□□□□ 0.61
TRAV16A0A0A6YYK6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV16A0A0A6YYK6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV16A0A0A6YYK6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV16A0A0A6YYK6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV16A0A0A6YYK6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV16A0A0A6YYK6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV16A0A0A6YYK6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRAV16A0A0A6YYK6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV16A0A0A6YYK6 ABCB10P1-201ENST00000614297 2181 ntBASIC18.83■□□□□ 0.6
TRAV16A0A0A6YYK6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV16A0A0A6YYK6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRAV16A0A0A6YYK6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV16A0A0A6YYK6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV16A0A0A6YYK6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV16A0A0A6YYK6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV16A0A0A6YYK6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV16A0A0A6YYK6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV16A0A0A6YYK6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV16A0A0A6YYK6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV16A0A0A6YYK6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV16A0A0A6YYK6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV16A0A0A6YYK6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV16A0A0A6YYK6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV16A0A0A6YYK6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV16A0A0A6YYK6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV16A0A0A6YYK6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV16A0A0A6YYK6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV16A0A0A6YYK6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV16A0A0A6YYK6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRAV16A0A0A6YYK6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV16A0A0A6YYK6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV16A0A0A6YYK6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV16A0A0A6YYK6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV16A0A0A6YYK6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV16A0A0A6YYK6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV16A0A0A6YYK6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV16A0A0A6YYK6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRAV16A0A0A6YYK6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV16A0A0A6YYK6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAV16A0A0A6YYK6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV16A0A0A6YYK6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV16A0A0A6YYK6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV16A0A0A6YYK6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV16A0A0A6YYK6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms