Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL390728.4-202ENST00000606173 430 ntTSL 3 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 CCDC181-201ENST00000367805 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 AC026691.1-201ENST00000602502 2017 ntBASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 TREM2-201ENST00000338469 860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 AC011005.1-201ENST00000467614 1263 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 HOXA-AS2-205ENST00000518088 509 ntTSL 3 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 AP003469.2-201ENST00000524369 430 ntTSL 3 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 CYB561A3-213ENST00000539890 572 ntTSL 4 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 LINC00663-207ENST00000590092 1023 ntTSL 5 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 MED8-201ENST00000290663 1483 ntTSL 5 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 SNAPC5-202ENST00000316634 1002 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 RN7SKP170-201ENST00000362550 328 ntBASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 ACTG1P10-201ENST00000428275 1082 ntBASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 LINC00222-207ENST00000448744 1751 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 RPS19P7-201ENST00000455650 396 ntBASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 RN7SL674P-201ENST00000463397 275 ntBASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 EHMT1-210ENST00000478940 591 ntTSL 4 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 CCNH-203ENST00000504878 1497 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 MYCT1-202ENST00000529453 724 ntTSL 3 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 AP003028.1-201ENST00000577699 1033 ntTSL 5 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 AC011472.2-201ENST00000586356 655 ntTSL 2 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 MXRA7-206ENST00000589082 560 ntAPPRIS ALT2 TSL 4 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 CBR3-AS1-205ENST00000608622 586 ntTSL 5 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 AL365203.3-201ENST00000609742 2057 ntBASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 AL118508.1-201ENST00000613502 2345 ntBASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 PRSS2-205ENST00000632998 817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 AC089987.1-202ENST00000641959 426 ntBASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RIMBP3Q9UFD9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 KRTAP19-2-201ENST00000334055 380 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 MAPT-202ENST00000334239 1107 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 AC004231.1-201ENST00000418393 815 ntTSL 5 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 LSP1P3-201ENST00000449530 208 ntBASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 C21orf62-203ENST00000487113 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 IGHVII-65-1-201ENST00000519992 302 ntBASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 AC091114.1-201ENST00000522815 630 ntTSL 3 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 AC126471.1-201ENST00000550676 362 ntBASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 Metazoa_SRP.51-201ENST00000570437 272 ntBASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 AC099343.2-201ENST00000605082 686 ntBASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 AL359183.1-201ENST00000623796 2132 ntBASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RIMBP3Q9UFD9 KRT8P5-201ENST00000592443 1458 ntBASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 BTNL2-201ENST00000374993 1368 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 GPHA2-201ENST00000279168 747 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 RPL30-201ENST00000287038 543 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 OBP2A-202ENST00000342114 607 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 APOBEC3F-202ENST00000381565 616 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 OR10D5P-201ENST00000392760 915 ntBASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 PRADC1P1-201ENST00000412317 525 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms