Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC012441.1-201ENST00000446669 685 ntBASIC11.39□□□□□ -0.59
RAB40CQ96S21 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 TP53TG3HP-202ENST00000569755 579 ntBASIC11.39□□□□□ -0.59
RAB40CQ96S21 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 OR10B1P-201ENST00000601666 907 ntBASIC11.39□□□□□ -0.59
RAB40CQ96S21 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 AL591471.1-201ENST00000621855 229 ntBASIC11.39□□□□□ -0.59
RAB40CQ96S21 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB40CQ96S21 HSPA8P9-201ENST00000485881 1943 ntBASIC11.39□□□□□ -0.59
RAB40CQ96S21 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB40CQ96S21 FMO6P-201ENST00000236166 1620 ntBASIC11.38□□□□□ -0.59
RAB40CQ96S21 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 AC134312.5-201ENST00000568031 1313 ntBASIC11.38□□□□□ -0.59
RAB40CQ96S21 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.38□□□□□ -0.59
RAB40CQ96S21 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 FAM8A4P-201ENST00000435433 1213 ntBASIC11.38□□□□□ -0.59
RAB40CQ96S21 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 ELK1P1-201ENST00000485699 580 ntBASIC11.38□□□□□ -0.59
RAB40CQ96S21 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 MIR4683-201ENST00000579659 81 ntBASIC11.38□□□□□ -0.59
RAB40CQ96S21 CTBP2P3-201ENST00000585629 1255 ntBASIC11.38□□□□□ -0.59
RAB40CQ96S21 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB40CQ96S21 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB40CQ96S21 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 FAM95B1-212ENST00000592873 4692 ntBASIC11.37□□□□□ -0.59
RAB40CQ96S21 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms