Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 LAP3P2-201ENST00000454686 1454 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 AC073869.1-201ENST00000415574 2762 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 PMEL-214ENST00000550447 901 ntTSL 3 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 AC010632.2-201ENST00000588369 1224 ntBASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 AC108724.1-201ENST00000481669 352 ntBASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 HNRNPA1P16-201ENST00000575692 955 ntBASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 MIR5001-201ENST00000580185 100 ntBASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 AC233280.19-201ENST00000633223 136 ntBASIC12.71□□□□□ -0.37
RP1L1Q8IWN7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.71□□□□□ -0.38
RP1L1Q8IWN7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 ABCD1P4-201ENST00000399687 604 ntBASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 RPL14-203ENST00000416518 812 ntTSL 3 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 STK24P1-201ENST00000455035 1291 ntBASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 RNA5SP406-201ENST00000516106 112 ntBASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 CICP14-201ENST00000629111 2732 ntBASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RP1L1Q8IWN7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms