Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.67□□□□□ -0.38
ATG4DQ86TL0 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 AC007326.2-201ENST00000624224 7579 ntBASIC12.66□□□□□ -0.38
ATG4DQ86TL0 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 MKRN5P-201ENST00000445263 1467 ntBASIC12.66□□□□□ -0.38
ATG4DQ86TL0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 AC020763.3-201ENST00000625095 2904 ntBASIC12.66□□□□□ -0.38
ATG4DQ86TL0 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 NRADDP-202ENST00000641269 1585 ntBASIC12.66□□□□□ -0.38
ATG4DQ86TL0 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 LINC00265-2P-201ENST00000413372 782 ntBASIC12.66□□□□□ -0.38
ATG4DQ86TL0 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.66□□□□□ -0.38
ATG4DQ86TL0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 RTN3P1-201ENST00000536295 711 ntBASIC12.66□□□□□ -0.38
ATG4DQ86TL0 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 AL109837.1-201ENST00000603272 613 ntBASIC12.66□□□□□ -0.38
ATG4DQ86TL0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 AC007718.1-201ENST00000621078 280 ntBASIC12.66□□□□□ -0.38
ATG4DQ86TL0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.66□□□□□ -0.38
ATG4DQ86TL0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 AC131212.3-201ENST00000624087 4219 ntBASIC12.65□□□□□ -0.38
ATG4DQ86TL0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 AC007274.2-201ENST00000421675 662 ntBASIC12.65□□□□□ -0.38
ATG4DQ86TL0 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 AC007279.1-201ENST00000448547 837 ntBASIC12.65□□□□□ -0.38
ATG4DQ86TL0 AC114947.1-202ENST00000514136 344 ntBASIC12.65□□□□□ -0.38
ATG4DQ86TL0 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATG4DQ86TL0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms