Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 AC074138.1-201ENST00000611182 1303 ntBASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.61□□□□□ -0.07
RFWD3Q6PCD5 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 AL365181.3-201ENST00000605886 3222 ntBASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 NOC2LP1-201ENST00000450578 752 ntBASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 CHCHD2P2-201ENST00000503744 321 ntBASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 MRPL22P1-201ENST00000505398 616 ntBASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 AC095040.1-201ENST00000513286 675 ntBASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 RN7SL455P-201ENST00000580629 282 ntBASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 MIR4706-201ENST00000582134 82 ntBASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 RPL13AP3-202ENST00000494676 1473 ntBASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 AL590824.1-201ENST00000403828 1349 ntBASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 SHMT1P1-201ENST00000419974 1312 ntBASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.6□□□□□ -0.07
RFWD3Q6PCD5 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 BX679664.3-201ENST00000414070 555 ntBASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AC113935.1-201ENST00000471722 555 ntBASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AC007881.3-201ENST00000608897 607 ntBASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AC242376.2-201ENST00000619355 883 ntBASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AC009145.4-201ENST00000625119 1294 ntBASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AC090643.2-201ENST00000623442 2029 ntBASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms