Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ISCA2P1-201ENST00000425548 448 ntBASIC13.5□□□□□ -0.25
PCDH1Q08174 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.5□□□□□ -0.25
PCDH1Q08174 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.5□□□□□ -0.25
PCDH1Q08174 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDH1Q08174 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.5□□□□□ -0.25
PCDH1Q08174 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.5□□□□□ -0.25
PCDH1Q08174 AC114947.1-202ENST00000514136 344 ntBASIC13.5□□□□□ -0.25
PCDH1Q08174 SCARNA20.5-201ENST00000516991 142 ntBASIC13.5□□□□□ -0.25
PCDH1Q08174 POU5F1P2-201ENST00000521750 823 ntBASIC13.5□□□□□ -0.25
PCDH1Q08174 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.5□□□□□ -0.25
PCDH1Q08174 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.5□□□□□ -0.25
PCDH1Q08174 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDH1Q08174 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.5□□□□□ -0.25
PCDH1Q08174 RN7SL774P-201ENST00000577467 290 ntBASIC13.5□□□□□ -0.25
PCDH1Q08174 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.5□□□□□ -0.25
PCDH1Q08174 AC020914.3-201ENST00000594712 304 ntBASIC13.5□□□□□ -0.25
PCDH1Q08174 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.5□□□□□ -0.25
PCDH1Q08174 AL021707.6-201ENST00000609212 491 ntBASIC13.5□□□□□ -0.25
PCDH1Q08174 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PCDH1Q08174 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDH1Q08174 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDH1Q08174 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 AC015909.3-201ENST00000572855 1794 ntBASIC13.5□□□□□ -0.25
PCDH1Q08174 NUTM2HP-201ENST00000442076 2498 ntBASIC13.5□□□□□ -0.25
PCDH1Q08174 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDH1Q08174 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
PCDH1Q08174 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDH1Q08174 MKRN5P-201ENST00000445263 1467 ntBASIC13.49□□□□□ -0.25
PCDH1Q08174 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 AKR7A2P1-201ENST00000460134 915 ntBASIC13.49□□□□□ -0.25
PCDH1Q08174 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.49□□□□□ -0.25
PCDH1Q08174 RN7SL258P-201ENST00000478664 300 ntBASIC13.49□□□□□ -0.25
PCDH1Q08174 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.49□□□□□ -0.25
PCDH1Q08174 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDH1Q08174 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.49□□□□□ -0.25
PCDH1Q08174 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
PCDH1Q08174 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
PCDH1Q08174 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.49□□□□□ -0.25
PCDH1Q08174 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDH1Q08174 MIR6769A-201ENST00000617340 73 ntBASIC13.49□□□□□ -0.25
PCDH1Q08174 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDH1Q08174 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
PCDH1Q08174 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDH1Q08174 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
PCDH1Q08174 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDH1Q08174 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms