Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
RFC5P40937 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC5P40937 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RFC5P40937 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.39■□□□□ 0.05
RFC5P40937 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.39■□□□□ 0.05
RFC5P40937 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC5P40937 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RFC5P40937 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.39■□□□□ 0.05
RFC5P40937 GGTLC4P-201ENST00000402176 664 ntBASIC15.39■□□□□ 0.05
RFC5P40937 AC073210.1-201ENST00000414799 232 ntBASIC15.39■□□□□ 0.05
RFC5P40937 AC004837.1-201ENST00000446267 564 ntBASIC15.39■□□□□ 0.05
RFC5P40937 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RFC5P40937 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC5P40937 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.39■□□□□ 0.05
RFC5P40937 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.39■□□□□ 0.05
RFC5P40937 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RFC5P40937 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 DGCR9-201ENST00000609630 2415 ntBASIC15.39■□□□□ 0.05
RFC5P40937 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RFC5P40937 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC5P40937 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RFC5P40937 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.39■□□□□ 0.05
RFC5P40937 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 AF013593.1-201ENST00000458074 1487 ntBASIC15.39■□□□□ 0.05
RFC5P40937 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC5P40937 AC011474.4-201ENST00000623523 2076 ntBASIC15.39■□□□□ 0.05
RFC5P40937 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC5P40937 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC5P40937 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RFC5P40937 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC5P40937 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC5P40937 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
RFC5P40937 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 AC117503.4-201ENST00000623229 1418 ntBASIC15.38■□□□□ 0.05
RFC5P40937 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC5P40937 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC5P40937 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC15.38■□□□□ 0.05
RFC5P40937 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RFC5P40937 RPL35P9-201ENST00000446059 350 ntBASIC15.38■□□□□ 0.05
RFC5P40937 AC006529.1-201ENST00000459978 637 ntBASIC15.38■□□□□ 0.05
RFC5P40937 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC5P40937 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 AC091917.2-201ENST00000505002 744 ntBASIC15.38■□□□□ 0.05
RFC5P40937 AC100858.1-201ENST00000514059 1228 ntBASIC15.38■□□□□ 0.05
RFC5P40937 AC226150.1-201ENST00000544259 466 ntBASIC15.38■□□□□ 0.05
RFC5P40937 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RFC5P40937 MIR3940-201ENST00000579148 102 ntBASIC15.38■□□□□ 0.05
RFC5P40937 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.38■□□□□ 0.05
RFC5P40937 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC5P40937 AC002044.2-201ENST00000624910 970 ntBASIC15.38■□□□□ 0.05
RFC5P40937 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC5P40937 CFTRP2-201ENST00000634304 199 ntBASIC15.38■□□□□ 0.05
RFC5P40937 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC5P40937 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RFC5P40937 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 AGAP10P-201ENST00000454844 2418 ntBASIC15.38■□□□□ 0.05
RFC5P40937 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC5P40937 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
RFC5P40937 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC5P40937 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 SALL4P6-201ENST00000429385 1691 ntBASIC15.38■□□□□ 0.05
RFC5P40937 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RFC5P40937 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC5P40937 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
RFC5P40937 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 AL928921.2-201ENST00000641325 2442 ntBASIC15.37■□□□□ 0.05
RFC5P40937 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms