Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CHRNA3P32297 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA3P32297 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 AC026271.4-201ENST00000578214 1833 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHRNA3P32297 AL157791.1-201ENST00000553667 1699 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CHRNA3P32297 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA3P32297 SHMT1P1-201ENST00000419974 1312 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CHRNA3P32297 AL662890.1-201ENST00000396818 632 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.78□□□□□ -0.04
CHRNA3P32297 Z97180.1-201ENST00000445173 988 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.78□□□□□ -0.04
CHRNA3P32297 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNA3P32297 RCC2P8-201ENST00000502779 1035 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.78□□□□□ -0.04
CHRNA3P32297 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA3P32297 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.78□□□□□ -0.04
CHRNA3P32297 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA3P32297 AC124068.2-201ENST00000569473 1109 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.78□□□□□ -0.04
CHRNA3P32297 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNA3P32297 AL021578.1-201ENST00000613646 709 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 AC133540.1-201ENST00000620845 1019 ntBASIC14.78□□□□□ -0.04
CHRNA3P32297 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNA3P32297 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CHRNA3P32297 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHRNA3P32297 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHRNA3P32297 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNA3P32297 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA3P32297 PCDHA6-201ENST00000378126 3267 ntBASIC14.77□□□□□ -0.04
CHRNA3P32297 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CHRNA3P32297 CYP4F23P-201ENST00000593402 1579 ntBASIC14.77□□□□□ -0.04
CHRNA3P32297 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA3P32297 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA3P32297 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.77□□□□□ -0.04
CHRNA3P32297 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA3P32297 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA3P32297 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA3P32297 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CHRNA3P32297 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA3P32297 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA3P32297 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNA3P32297 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA3P32297 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.77□□□□□ -0.05
CHRNA3P32297 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA3P32297 SNORA50C-201ENST00000408535 133 ntBASIC14.77□□□□□ -0.05
CHRNA3P32297 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA3P32297 AC078875.1-201ENST00000431907 724 ntBASIC14.77□□□□□ -0.05
CHRNA3P32297 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNA3P32297 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.77□□□□□ -0.05
CHRNA3P32297 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CHRNA3P32297 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA3P32297 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CHRNA3P32297 MIR3619-201ENST00000579667 83 ntBASIC14.77□□□□□ -0.05
CHRNA3P32297 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.77□□□□□ -0.05
CHRNA3P32297 AP001505.2-201ENST00000616815 443 ntBASIC14.77□□□□□ -0.05
CHRNA3P32297 SNORA50.1-201ENST00000628590 135 ntBASIC14.77□□□□□ -0.05
CHRNA3P32297 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
CHRNA3P32297 AC138627.1-207ENST00000641560 1006 ntBASIC14.77□□□□□ -0.05
CHRNA3P32297 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.77□□□□□ -0.05
CHRNA3P32297 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CHRNA3P32297 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA3P32297 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNA3P32297 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNA3P32297 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CHRNA3P32297 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNA3P32297 Z98257.2-202ENST00000641138 1548 ntBASIC14.76□□□□□ -0.05
CHRNA3P32297 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNA3P32297 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CHRNA3P32297 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms