Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA5P30532 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA5P30532 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA5P30532 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRNA5P30532 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA5P30532 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 DUX4L31-201ENST00000446466 1136 ntBASIC16.76■□□□□ 0.27
CHRNA5P30532 RPL35P1-201ENST00000450819 370 ntBASIC16.76■□□□□ 0.27
CHRNA5P30532 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA5P30532 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRNA5P30532 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA5P30532 MIR5193-201ENST00000584510 109 ntBASIC16.76■□□□□ 0.27
CHRNA5P30532 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA5P30532 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 AC015656.1-201ENST00000624209 3578 ntBASIC16.76■□□□□ 0.27
CHRNA5P30532 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CHRNA5P30532 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 HSPA7-201ENST00000445535 1927 ntBASIC16.76■□□□□ 0.27
CHRNA5P30532 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA5P30532 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA5P30532 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA5P30532 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA5P30532 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CHRNA5P30532 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 THAP4-203ENST00000402545 833 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA5P30532 U3.41-201ENST00000408711 219 ntBASIC16.75■□□□□ 0.27
CHRNA5P30532 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC16.75■□□□□ 0.27
CHRNA5P30532 RN7SL69P-201ENST00000468423 272 ntBASIC16.75■□□□□ 0.27
CHRNA5P30532 RN7SL22P-201ENST00000471800 269 ntBASIC16.75■□□□□ 0.27
CHRNA5P30532 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 RN7SL789P-201ENST00000478944 293 ntBASIC16.75■□□□□ 0.27
CHRNA5P30532 RN7SL47P-201ENST00000488710 299 ntBASIC16.75■□□□□ 0.27
CHRNA5P30532 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA5P30532 SAA2-206ENST00000530400 323 ntTSL 3 BASIC16.75■□□□□ 0.27
CHRNA5P30532 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
CHRNA5P30532 HAX1-211ENST00000532105 771 ntTSL 3 BASIC16.75■□□□□ 0.27
CHRNA5P30532 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA5P30532 DERL2-206ENST00000572834 589 ntTSL 3 BASIC16.75■□□□□ 0.27
CHRNA5P30532 RN7SL162P-201ENST00000579233 292 ntBASIC16.75■□□□□ 0.27
CHRNA5P30532 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CHRNA5P30532 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA5P30532 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA5P30532 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA5P30532 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CHRNA5P30532 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHRNA5P30532 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA5P30532 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CHRNA5P30532 NAA10-205ENST00000393712 908 ntTSL 5 BASIC16.74■□□□□ 0.27
CHRNA5P30532 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC16.74■□□□□ 0.27
CHRNA5P30532 SERF2-204ENST00000402131 586 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA5P30532 NOS2P3-201ENST00000411468 867 ntBASIC16.74■□□□□ 0.27
CHRNA5P30532 NOS2P2-201ENST00000426269 867 ntBASIC16.74■□□□□ 0.27
CHRNA5P30532 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC16.74■□□□□ 0.27
CHRNA5P30532 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 AL136298.3-201ENST00000556746 445 ntBASIC16.74■□□□□ 0.27
CHRNA5P30532 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 AC021321.1-201ENST00000607397 1113 ntBASIC16.74■□□□□ 0.27
CHRNA5P30532 AC211476.2-201ENST00000608799 708 ntBASIC16.74■□□□□ 0.27
CHRNA5P30532 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 AC020763.3-201ENST00000625095 2904 ntBASIC16.74■□□□□ 0.27
CHRNA5P30532 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 BX640514.1-201ENST00000583223 1918 ntBASIC16.74■□□□□ 0.27
CHRNA5P30532 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHRNA5P30532 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA5P30532 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms