Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL1P22362 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC11.99□□□□□ -0.49
CCL1P22362 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.99□□□□□ -0.49
CCL1P22362 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.99□□□□□ -0.49
CCL1P22362 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.99□□□□□ -0.49
CCL1P22362 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.99□□□□□ -0.49
CCL1P22362 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.99□□□□□ -0.49
CCL1P22362 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL1P22362 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.99□□□□□ -0.49
CCL1P22362 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 NKAIN1P1-201ENST00000435754 582 ntBASIC11.99□□□□□ -0.49
CCL1P22362 AC004898.1-201ENST00000451057 766 ntBASIC11.99□□□□□ -0.49
CCL1P22362 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC11.99□□□□□ -0.49
CCL1P22362 OARD1-204ENST00000464633 717 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL1P22362 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL1P22362 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC11.99□□□□□ -0.49
CCL1P22362 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.99□□□□□ -0.49
CCL1P22362 NAP1L6-202ENST00000641404 1222 ntBASIC11.99□□□□□ -0.49
CCL1P22362 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC11.99□□□□□ -0.49
CCL1P22362 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
CCL1P22362 IL9RP3-201ENST00000442856 1674 ntBASIC11.99□□□□□ -0.49
CCL1P22362 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.99□□□□□ -0.49
CCL1P22362 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL1P22362 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
CCL1P22362 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL1P22362 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL1P22362 Z82170.1-201ENST00000625081 3192 ntBASIC11.99□□□□□ -0.49
CCL1P22362 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL1P22362 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CCL1P22362 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL1P22362 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CCL1P22362 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL1P22362 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CCL1P22362 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
CCL1P22362 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CCL1P22362 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL1P22362 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CCL1P22362 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 GDA-203ENST00000376986 1771 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL1P22362 PES1P2-201ENST00000449745 1735 ntBASIC11.98□□□□□ -0.49
CCL1P22362 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL1P22362 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CCL1P22362 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL1P22362 KRT8P18-201ENST00000413425 1445 ntBASIC11.98□□□□□ -0.49
CCL1P22362 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL1P22362 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 FRMPD2B-201ENST00000431305 1347 ntBASIC11.98□□□□□ -0.49
CCL1P22362 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CCL1P22362 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms