Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AC008132.1-202ENST00000342005 1389 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 AL391647.1-201ENST00000395664 511 ntBASIC12.54□□□□□ -0.4
HLA-DOBP13765 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 AL008707.1-201ENST00000422498 534 ntBASIC12.54□□□□□ -0.4
HLA-DOBP13765 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 SLC25A15P3-201ENST00000505530 290 ntBASIC12.54□□□□□ -0.4
HLA-DOBP13765 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 ACTG1P17-201ENST00000558391 1119 ntBASIC12.54□□□□□ -0.4
HLA-DOBP13765 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 MIR4525-201ENST00000580000 75 ntBASIC12.54□□□□□ -0.4
HLA-DOBP13765 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DOBP13765 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DOBP13765 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DOBP13765 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DOBP13765 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms