Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC1P02654 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.47□□□□□ -0.41
APOC1P02654 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 GOLGA2P8-201ENST00000505201 779 ntBASIC12.47□□□□□ -0.41
APOC1P02654 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC1P02654 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC1P02654 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.47□□□□□ -0.41
APOC1P02654 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC1P02654 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC1P02654 AC010328.2-201ENST00000597698 1111 ntBASIC12.47□□□□□ -0.41
APOC1P02654 AL136295.7-201ENST00000619226 1200 ntBASIC12.47□□□□□ -0.41
APOC1P02654 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.47□□□□□ -0.41
APOC1P02654 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 AC072061.1-201ENST00000569710 2234 ntBASIC12.47□□□□□ -0.41
APOC1P02654 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
APOC1P02654 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC1P02654 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC1P02654 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 RPL13AP3-202ENST00000494676 1473 ntBASIC12.46□□□□□ -0.41
APOC1P02654 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
APOC1P02654 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC1P02654 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC1P02654 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
APOC1P02654 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC1P02654 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
APOC1P02654 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
APOC1P02654 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC1P02654 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
APOC1P02654 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
APOC1P02654 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.46□□□□□ -0.41
APOC1P02654 XBP1P1-201ENST00000436573 652 ntBASIC12.46□□□□□ -0.41
APOC1P02654 POM121L10P-201ENST00000436994 1285 ntBASIC12.46□□□□□ -0.41
APOC1P02654 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.46□□□□□ -0.41
APOC1P02654 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
APOC1P02654 MTX1P1-201ENST00000440904 838 ntBASIC12.46□□□□□ -0.41
APOC1P02654 KLF2P1-201ENST00000447438 1042 ntBASIC12.46□□□□□ -0.41
APOC1P02654 Z93015.1-201ENST00000451718 390 ntBASIC12.46□□□□□ -0.41
APOC1P02654 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.46□□□□□ -0.41
APOC1P02654 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.46□□□□□ -0.41
APOC1P02654 MIR4741-201ENST00000579822 90 ntBASIC12.46□□□□□ -0.41
APOC1P02654 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
APOC1P02654 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
APOC1P02654 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC1P02654 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
APOC1P02654 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
APOC1P02654 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.46□□□□□ -0.42
APOC1P02654 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC1P02654 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC1P02654 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.46□□□□□ -0.42
APOC1P02654 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
APOC1P02654 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC1P02654 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC1P02654 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.46□□□□□ -0.42
APOC1P02654 RCC2P1-201ENST00000452257 1476 ntBASIC12.46□□□□□ -0.42
APOC1P02654 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOC1P02654 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
APOC1P02654 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.46□□□□□ -0.42
APOC1P02654 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
APOC1P02654 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
APOC1P02654 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms