Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.04□□□□□ -0.16
SMAD6O43541 KRT18P8-201ENST00000581937 1246 ntBASIC14.04□□□□□ -0.16
SMAD6O43541 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.04□□□□□ -0.16
SMAD6O43541 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.04□□□□□ -0.16
SMAD6O43541 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SMAD6O43541 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.04□□□□□ -0.16
SMAD6O43541 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.04□□□□□ -0.16
SMAD6O43541 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 RCC2P5-201ENST00000492126 1487 ntBASIC14.04□□□□□ -0.16
SMAD6O43541 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 AC005840.4-201ENST00000541242 2494 ntBASIC14.04□□□□□ -0.16
SMAD6O43541 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 BEND3P1-201ENST00000421591 1944 ntBASIC14.03□□□□□ -0.16
SMAD6O43541 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.03□□□□□ -0.16
SMAD6O43541 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.03□□□□□ -0.16
SMAD6O43541 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.03□□□□□ -0.16
SMAD6O43541 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SMAD6O43541 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SMAD6O43541 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 AC106827.1-201ENST00000366454 431 ntBASIC14.03□□□□□ -0.16
SMAD6O43541 OR7E115P-201ENST00000382617 1024 ntBASIC14.03□□□□□ -0.16
SMAD6O43541 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.03□□□□□ -0.16
SMAD6O43541 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 DKKL1P1-201ENST00000400550 698 ntBASIC14.03□□□□□ -0.16
SMAD6O43541 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.03□□□□□ -0.16
SMAD6O43541 AC108734.2-201ENST00000420887 1069 ntBASIC14.03□□□□□ -0.16
SMAD6O43541 RPL35P9-201ENST00000446059 350 ntBASIC14.03□□□□□ -0.16
SMAD6O43541 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SMAD6O43541 LINC00634-202ENST00000505157 222 ntBASIC14.03□□□□□ -0.16
SMAD6O43541 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.03□□□□□ -0.16
SMAD6O43541 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.03□□□□□ -0.16
SMAD6O43541 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.03□□□□□ -0.16
SMAD6O43541 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SMAD6O43541 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SMAD6O43541 AF013593.1-201ENST00000458074 1487 ntBASIC14.03□□□□□ -0.16
SMAD6O43541 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.03□□□□□ -0.16
SMAD6O43541 AL359881.3-201ENST00000602640 1721 ntBASIC14.03□□□□□ -0.16
SMAD6O43541 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SMAD6O43541 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.03□□□□□ -0.16
SMAD6O43541 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 CICP4-201ENST00000447359 2812 ntBASIC14.03□□□□□ -0.16
SMAD6O43541 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SMAD6O43541 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMAD6O43541 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SMAD6O43541 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SMAD6O43541 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMAD6O43541 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMAD6O43541 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMAD6O43541 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.02□□□□□ -0.16
SMAD6O43541 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
SMAD6O43541 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.02□□□□□ -0.16
SMAD6O43541 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.02□□□□□ -0.16
SMAD6O43541 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMAD6O43541 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMAD6O43541 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.02□□□□□ -0.16
SMAD6O43541 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.02□□□□□ -0.16
SMAD6O43541 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SMAD6O43541 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 SNORA50C-201ENST00000408535 133 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.02□□□□□ -0.17
SMAD6O43541 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.02□□□□□ -0.17
SMAD6O43541 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.02□□□□□ -0.17
SMAD6O43541 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms