Protein–RNA interactions for Protein: O00329

PIK3CD, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CDO00329 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIK3CDO00329 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PIK3CDO00329 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PIK3CDO00329 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 AL359845.1-201ENST00000458202 1648 ntBASIC15.65■□□□□ 0.1
PIK3CDO00329 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.65■□□□□ 0.1
PIK3CDO00329 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PIK3CDO00329 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.65■□□□□ 0.1
PIK3CDO00329 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PIK3CDO00329 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 AL391647.1-201ENST00000395664 511 ntBASIC15.65■□□□□ 0.1
PIK3CDO00329 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.65■□□□□ 0.1
PIK3CDO00329 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.65■□□□□ 0.1
PIK3CDO00329 GCSHP3-201ENST00000431120 391 ntBASIC15.65■□□□□ 0.1
PIK3CDO00329 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC15.65■□□□□ 0.1
PIK3CDO00329 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.65■□□□□ 0.1
PIK3CDO00329 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 MIR4472-1-201ENST00000584349 80 ntBASIC15.65■□□□□ 0.1
PIK3CDO00329 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PIK3CDO00329 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.65■□□□□ 0.1
PIK3CDO00329 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.65■□□□□ 0.1
PIK3CDO00329 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PIK3CDO00329 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PIK3CDO00329 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PIK3CDO00329 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.65■□□□□ 0.1
PIK3CDO00329 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PIK3CDO00329 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.65■□□□□ 0.1
PIK3CDO00329 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PIK3CDO00329 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
PIK3CDO00329 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.64■□□□□ 0.09
PIK3CDO00329 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PIK3CDO00329 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.64■□□□□ 0.09
PIK3CDO00329 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PIK3CDO00329 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.64■□□□□ 0.09
PIK3CDO00329 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.64■□□□□ 0.09
PIK3CDO00329 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.64■□□□□ 0.09
PIK3CDO00329 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.64■□□□□ 0.09
PIK3CDO00329 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC15.64■□□□□ 0.09
PIK3CDO00329 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 AC005840.4-201ENST00000541242 2494 ntBASIC15.64■□□□□ 0.09
PIK3CDO00329 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PIK3CDO00329 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC15.64■□□□□ 0.09
PIK3CDO00329 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 AC010976.2-201ENST00000609697 852 ntBASIC15.64■□□□□ 0.09
PIK3CDO00329 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 AC011471.3-201ENST00000623576 402 ntBASIC15.64■□□□□ 0.09
PIK3CDO00329 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 LINC00431-202ENST00000636375 159 ntBASIC15.64■□□□□ 0.09
PIK3CDO00329 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.64■□□□□ 0.09
PIK3CDO00329 MIR600HG-201ENST00000449175 5984 ntBASIC15.64■□□□□ 0.09
PIK3CDO00329 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PIK3CDO00329 MANEA-AS1-201ENST00000564541 2268 ntBASIC15.64■□□□□ 0.09
PIK3CDO00329 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PIK3CDO00329 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIK3CDO00329 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIK3CDO00329 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIK3CDO00329 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIK3CDO00329 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.63■□□□□ 0.09
PIK3CDO00329 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
PIK3CDO00329 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIK3CDO00329 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms