Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 SERF2-204ENST00000402131 586 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 STK33P1-201ENST00000423835 1218 ntBASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 HNRNPA1P30-202ENST00000440699 997 ntBASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 AC005077.3-201ENST00000449614 213 ntBASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 BICD1P1-201ENST00000457832 1222 ntBASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 AC067942.1-202ENST00000471756 1057 ntBASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 PTS-204ENST00000525803 625 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 AC106782.3-201ENST00000563429 258 ntBASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 MIR378I-201ENST00000582688 76 ntBASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 AP006621.5-202ENST00000623692 636 ntBASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 FER1L4-210ENST00000615531 5998 ntBASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 AC089987.1-201ENST00000551654 2209 ntBASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 FKBP4P1-201ENST00000507284 1347 ntBASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 MIR4539-201ENST00000579784 60 ntBASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 AC013472.3-201ENST00000607407 659 ntBASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM88BA6NKF7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 AC040160.2-201ENST00000623816 1675 ntBASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 HNRNPA1P9-201ENST00000450624 950 ntBASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 HNRNPA1P7-201ENST00000521273 963 ntBASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 AKR1B1P3-201ENST00000525311 588 ntBASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 KRT18P8-201ENST00000581937 1246 ntBASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 MED25-209ENST00000612791 881 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM88BA6NKF7 KRT18P40-201ENST00000599859 1571 ntBASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms