Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 AC027612.1-201ENST00000445234 2395 ntBASIC14.24□□□□□ -0.13
CCDC78A2IDD5 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 LINC01165-201ENST00000445190 1623 ntBASIC14.24□□□□□ -0.13
CCDC78A2IDD5 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 AC243960.2-201ENST00000600996 747 ntBASIC14.24□□□□□ -0.13
CCDC78A2IDD5 AL606495.2-201ENST00000605867 535 ntBASIC14.24□□□□□ -0.13
CCDC78A2IDD5 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 KRT8P21-201ENST00000430398 1491 ntBASIC14.24□□□□□ -0.13
CCDC78A2IDD5 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC78A2IDD5 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 AL139158.3-201ENST00000641212 1562 ntBASIC14.23□□□□□ -0.13
CCDC78A2IDD5 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 EIF4HP1-201ENST00000453115 687 ntBASIC14.23□□□□□ -0.13
CCDC78A2IDD5 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 AL022334.2-201ENST00000610000 484 ntBASIC14.23□□□□□ -0.13
CCDC78A2IDD5 MIR6787-201ENST00000616675 61 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms