Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 BAK1P1-201ENST00000317045 636 ntBASIC12.86□□□□□ -0.35
LRFN1Q9P244 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 AC092573.1-201ENST00000433054 884 ntBASIC12.86□□□□□ -0.35
LRFN1Q9P244 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 RN7SL375P-201ENST00000492442 298 ntBASIC12.86□□□□□ -0.35
LRFN1Q9P244 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.86□□□□□ -0.35
LRFN1Q9P244 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRFN1Q9P244 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
LRFN1Q9P244 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.85□□□□□ -0.35
LRFN1Q9P244 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 RNVU1-8-201ENST00000364272 125 ntBASIC12.85□□□□□ -0.35
LRFN1Q9P244 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 AC117489.1-201ENST00000625169 3217 ntBASIC12.85□□□□□ -0.35
LRFN1Q9P244 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRFN1Q9P244 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.85□□□□□ -0.35
LRFN1Q9P244 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 784.5 ms