Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 FAM90A7P-201ENST00000382628 1395 ntBASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 FAM90A23P-201ENST00000400136 1395 ntBASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 AC010970.1-201ENST00000445125 1848 ntBASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 AC026271.4-201ENST00000578214 1833 ntBASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 CSF2RBP1-201ENST00000447905 391 ntBASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 AP005482.1-201ENST00000563722 1273 ntBASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 MIR4741-201ENST00000579822 90 ntBASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 AC012645.4-201ENST00000610691 1061 ntBASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 AL139385.1-201ENST00000611744 3272 ntBASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THUMPD1Q9NXG2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 AC108024.1-201ENST00000626286 1721 ntBASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
THUMPD1Q9NXG2 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 AC115284.2-201ENST00000624646 2054 ntBASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 FAM21FP-201ENST00000426241 1131 ntBASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 AC078875.1-201ENST00000431907 724 ntBASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 GAPDHP21-201ENST00000450301 1010 ntBASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 Z93015.1-201ENST00000451718 390 ntBASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 RPL18P13-201ENST00000478088 569 ntBASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 HLA-J-204ENST00000495278 958 ntBASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.2□□□□□ -0.3
THUMPD1Q9NXG2 AC092299.1-201ENST00000632679 757 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms