Protein–RNA interactions for Protein: Q9C099

LRRCC1, Leucine-rich repeat and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1Q9C099 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRCC1Q9C099 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRCC1Q9C099 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRCC1Q9C099 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRCC1Q9C099 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRCC1Q9C099 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LRRCC1Q9C099 ZNF493-208ENST00000599461 1769 ntBASIC17.2■□□□□ 0.34
LRRCC1Q9C099 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRCC1Q9C099 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRCC1Q9C099 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRCC1Q9C099 CICP17-201ENST00000418553 2377 ntBASIC17.2■□□□□ 0.34
LRRCC1Q9C099 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 AC020658.7-201ENST00000624274 2442 ntBASIC17.19■□□□□ 0.34
LRRCC1Q9C099 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 NDUFS6P1-201ENST00000485187 316 ntBASIC17.19■□□□□ 0.34
LRRCC1Q9C099 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 AL021578.1-201ENST00000613646 709 ntBASIC17.19■□□□□ 0.34
LRRCC1Q9C099 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.19■□□□□ 0.34
LRRCC1Q9C099 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 AL445250.1-201ENST00000641671 2259 ntBASIC17.19■□□□□ 0.34
LRRCC1Q9C099 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRCC1Q9C099 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 AC245140.2-201ENST00000624054 1939 ntBASIC17.18■□□□□ 0.34
LRRCC1Q9C099 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 BCYRN1-201ENST00000418539 200 ntBASIC17.18■□□□□ 0.34
LRRCC1Q9C099 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 SCARNA12-201ENST00000459155 270 ntBASIC17.18■□□□□ 0.34
LRRCC1Q9C099 IMP3P2-201ENST00000489760 475 ntBASIC17.18■□□□□ 0.34
LRRCC1Q9C099 IGLV3-15-201ENST00000518356 244 ntBASIC17.18■□□□□ 0.34
LRRCC1Q9C099 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.18■□□□□ 0.34
LRRCC1Q9C099 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRCC1Q9C099 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms