Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 AL391647.1-201ENST00000395664 511 ntBASIC16.39■□□□□ 0.21
STAG1Q8WVM7 DKKL1P1-201ENST00000400550 698 ntBASIC16.39■□□□□ 0.21
STAG1Q8WVM7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 AC140113.1-201ENST00000603467 169 ntBASIC16.39■□□□□ 0.21
STAG1Q8WVM7 MIR6858-201ENST00000620733 67 ntBASIC16.39■□□□□ 0.21
STAG1Q8WVM7 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.39■□□□□ 0.21
STAG1Q8WVM7 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.38■□□□□ 0.21
STAG1Q8WVM7 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 AC073911.3-201ENST00000624401 631 ntBASIC16.38■□□□□ 0.21
STAG1Q8WVM7 LINC00244-201ENST00000625073 613 ntBASIC16.38■□□□□ 0.21
STAG1Q8WVM7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
STAG1Q8WVM7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 AC092638.2-201ENST00000441105 947 ntBASIC16.37■□□□□ 0.21
STAG1Q8WVM7 DPY19L2P5-201ENST00000456300 331 ntBASIC16.37■□□□□ 0.21
STAG1Q8WVM7 AC018463.1-201ENST00000456674 917 ntBASIC16.37■□□□□ 0.21
STAG1Q8WVM7 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 RN7SL375P-201ENST00000492442 298 ntBASIC16.37■□□□□ 0.21
STAG1Q8WVM7 RN7SKP155-201ENST00000516031 288 ntBASIC16.37■□□□□ 0.21
STAG1Q8WVM7 AP003398.1-201ENST00000531124 318 ntBASIC16.37■□□□□ 0.21
STAG1Q8WVM7 CR383656.3-201ENST00000551315 183 ntBASIC16.37■□□□□ 0.21
STAG1Q8WVM7 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.37■□□□□ 0.21
STAG1Q8WVM7 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms