Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HS1BP3Q53T59 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC15.67■□□□□ 0.1
HS1BP3Q53T59 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HS1BP3Q53T59 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AC112492.5-201ENST00000421897 457 ntBASIC15.66■□□□□ 0.1
HS1BP3Q53T59 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 KRT43P-201ENST00000434019 910 ntBASIC15.66■□□□□ 0.1
HS1BP3Q53T59 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 ELK1P1-201ENST00000485699 580 ntBASIC15.66■□□□□ 0.1
HS1BP3Q53T59 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AC036164.1-201ENST00000570544 333 ntBASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AC015936.2-201ENST00000593177 259 ntBASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AC004466.1-201ENST00000599515 1080 ntBASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 AL033527.5-201ENST00000641382 801 ntBASIC15.66■□□□□ 0.1
HS1BP3Q53T59 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HS1BP3Q53T59 FAM90A17P-201ENST00000533716 1957 ntBASIC15.66■□□□□ 0.1
HS1BP3Q53T59 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 LPP-AS2-201ENST00000605573 2852 ntBASIC15.65■□□□□ 0.1
HS1BP3Q53T59 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 MIR1909-201ENST00000411312 80 ntBASIC15.65■□□□□ 0.1
HS1BP3Q53T59 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 RPS2P32-201ENST00000439199 892 ntBASIC15.65■□□□□ 0.1
HS1BP3Q53T59 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 RARRES2P5-201ENST00000564013 466 ntBASIC15.65■□□□□ 0.1
HS1BP3Q53T59 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 TMEM261P1-201ENST00000604899 340 ntBASIC15.65■□□□□ 0.1
HS1BP3Q53T59 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HS1BP3Q53T59 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms