Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S2P56377 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
AP1S2P56377 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.64□□□□□ -0.23
AP1S2P56377 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S2P56377 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S2P56377 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S2P56377 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.64□□□□□ -0.23
AP1S2P56377 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
AP1S2P56377 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AP1S2P56377 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.64□□□□□ -0.23
AP1S2P56377 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.64□□□□□ -0.23
AP1S2P56377 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 AL591122.2-201ENST00000624125 1853 ntBASIC13.63□□□□□ -0.23
AP1S2P56377 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S2P56377 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S2P56377 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP1S2P56377 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S2P56377 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AP1S2P56377 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.63□□□□□ -0.23
AP1S2P56377 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.63□□□□□ -0.23
AP1S2P56377 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.63□□□□□ -0.23
AP1S2P56377 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP1S2P56377 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.63□□□□□ -0.23
AP1S2P56377 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 AC007274.1-201ENST00000439805 662 ntBASIC13.63□□□□□ -0.23
AP1S2P56377 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S2P56377 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.63□□□□□ -0.23
AP1S2P56377 RN7SL11P-201ENST00000471305 293 ntBASIC13.63□□□□□ -0.23
AP1S2P56377 AC099548.2-209ENST00000480264 625 ntBASIC13.63□□□□□ -0.23
AP1S2P56377 HIST2H2BC-201ENST00000498492 580 ntBASIC13.63□□□□□ -0.23
AP1S2P56377 AC008723.1-201ENST00000506922 207 ntBASIC13.63□□□□□ -0.23
AP1S2P56377 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.63□□□□□ -0.23
AP1S2P56377 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.63□□□□□ -0.23
AP1S2P56377 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.63□□□□□ -0.23
AP1S2P56377 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S2P56377 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
AP1S2P56377 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
AP1S2P56377 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AP1S2P56377 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S2P56377 AGAP12P-201ENST00000585227 2359 ntBASIC13.63□□□□□ -0.23
AP1S2P56377 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.62□□□□□ -0.23
AP1S2P56377 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.62□□□□□ -0.23
AP1S2P56377 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 AC108024.1-201ENST00000626286 1721 ntBASIC13.62□□□□□ -0.23
AP1S2P56377 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
AP1S2P56377 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
AP1S2P56377 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
AP1S2P56377 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S2P56377 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.62□□□□□ -0.23
AP1S2P56377 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.62□□□□□ -0.23
AP1S2P56377 Z97180.1-201ENST00000445173 988 ntBASIC13.62□□□□□ -0.23
AP1S2P56377 AC007279.1-201ENST00000448547 837 ntBASIC13.62□□□□□ -0.23
AP1S2P56377 AC073150.1-201ENST00000450406 1084 ntBASIC13.62□□□□□ -0.23
AP1S2P56377 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.62□□□□□ -0.23
AP1S2P56377 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms