Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LHX2P50458 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LHX2P50458 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LHX2P50458 AC089987.1-201ENST00000551654 2209 ntBASIC12.43□□□□□ -0.42
LHX2P50458 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LHX2P50458 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LHX2P50458 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LHX2P50458 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LHX2P50458 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.43□□□□□ -0.42
LHX2P50458 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.43□□□□□ -0.42
LHX2P50458 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LHX2P50458 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LHX2P50458 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LHX2P50458 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LHX2P50458 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LHX2P50458 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
LHX2P50458 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
LHX2P50458 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.43□□□□□ -0.42
LHX2P50458 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LHX2P50458 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.42□□□□□ -0.42
LHX2P50458 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.42□□□□□ -0.42
LHX2P50458 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 AC040160.2-201ENST00000623816 1675 ntBASIC12.42□□□□□ -0.42
LHX2P50458 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 BAK1P1-201ENST00000317045 636 ntBASIC12.42□□□□□ -0.42
LHX2P50458 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 CTBP2P4-201ENST00000513884 920 ntBASIC12.42□□□□□ -0.42
LHX2P50458 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.42□□□□□ -0.42
LHX2P50458 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 AC138466.5-201ENST00000624002 808 ntBASIC12.42□□□□□ -0.42
LHX2P50458 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 Z98885.3-201ENST00000624882 1757 ntBASIC12.42□□□□□ -0.42
LHX2P50458 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.42□□□□□ -0.42
LHX2P50458 AC023794.5-201ENST00000564380 2157 ntBASIC12.42□□□□□ -0.42
LHX2P50458 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.42□□□□□ -0.42
LHX2P50458 AC021305.1-201ENST00000520656 1514 ntBASIC12.42□□□□□ -0.42
LHX2P50458 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LHX2P50458 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LHX2P50458 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.41□□□□□ -0.42
LHX2P50458 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.41□□□□□ -0.42
LHX2P50458 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.41□□□□□ -0.42
LHX2P50458 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LHX2P50458 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LHX2P50458 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
LHX2P50458 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms