Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
LCN1P31025 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LCN1P31025 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LCN1P31025 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 AL391647.1-201ENST00000395664 511 ntBASIC13.01□□□□□ -0.33
LCN1P31025 LINC00265-2P-201ENST00000413372 782 ntBASIC13.01□□□□□ -0.33
LCN1P31025 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.01□□□□□ -0.33
LCN1P31025 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.01□□□□□ -0.33
LCN1P31025 ISCA2P1-201ENST00000425548 448 ntBASIC13.01□□□□□ -0.33
LCN1P31025 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.01□□□□□ -0.33
LCN1P31025 AL353637.1-201ENST00000451571 732 ntBASIC13.01□□□□□ -0.33
LCN1P31025 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.01□□□□□ -0.33
LCN1P31025 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.01□□□□□ -0.33
LCN1P31025 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.01□□□□□ -0.33
LCN1P31025 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.01□□□□□ -0.33
LCN1P31025 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.01□□□□□ -0.33
LCN1P31025 RN7SL774P-201ENST00000577467 290 ntBASIC13.01□□□□□ -0.33
LCN1P31025 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.01□□□□□ -0.33
LCN1P31025 LINC01783-202ENST00000614408 828 ntBASIC13.01□□□□□ -0.33
LCN1P31025 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.01□□□□□ -0.33
LCN1P31025 MIR6769A-201ENST00000617340 73 ntBASIC13.01□□□□□ -0.33
LCN1P31025 BX284668.2-205ENST00000619677 828 ntBASIC13.01□□□□□ -0.33
LCN1P31025 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LCN1P31025 AL139424.3-202ENST00000641619 917 ntBASIC13.01□□□□□ -0.33
LCN1P31025 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.01□□□□□ -0.33
LCN1P31025 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.01□□□□□ -0.33
LCN1P31025 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LCN1P31025 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LCN1P31025 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
LCN1P31025 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LCN1P31025 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LCN1P31025 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13□□□□□ -0.33
LCN1P31025 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
LCN1P31025 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13□□□□□ -0.33
LCN1P31025 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13□□□□□ -0.33
LCN1P31025 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LCN1P31025 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LCN1P31025 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13□□□□□ -0.33
LCN1P31025 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 MARK2P9-201ENST00000430958 1727 ntBASIC13□□□□□ -0.33
LCN1P31025 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 AC009474.1-201ENST00000455096 1565 ntBASIC13□□□□□ -0.33
LCN1P31025 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13□□□□□ -0.33
LCN1P31025 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13□□□□□ -0.33
LCN1P31025 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13□□□□□ -0.33
LCN1P31025 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 ELK2AP-201ENST00000392510 1007 ntBASIC13□□□□□ -0.33
LCN1P31025 BANF1P3-201ENST00000412556 261 ntBASIC13□□□□□ -0.33
LCN1P31025 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13□□□□□ -0.33
LCN1P31025 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13□□□□□ -0.33
LCN1P31025 PPP1R2P4-201ENST00000424051 595 ntBASIC13□□□□□ -0.33
LCN1P31025 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13□□□□□ -0.33
LCN1P31025 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13□□□□□ -0.33
LCN1P31025 AC114947.1-202ENST00000514136 344 ntBASIC13□□□□□ -0.33
LCN1P31025 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms