Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 AL365181.3-201ENST00000605886 3222 ntBASIC8.29□□□□□ -1.08
APOBP04114 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC8.29□□□□□ -1.08
APOBP04114 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 AC010442.2-201ENST00000509301 407 ntBASIC8.29□□□□□ -1.08
APOBP04114 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
APOBP04114 FKBP4P1-201ENST00000507284 1347 ntBASIC8.29□□□□□ -1.08
APOBP04114 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
APOBP04114 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 MESTP4-201ENST00000412333 1204 ntBASIC8.29□□□□□ -1.08
APOBP04114 AADAC-202ENST00000488869 719 ntTSL 2 BASIC8.29□□□□□ -1.08
APOBP04114 DNM1P17-201ENST00000512082 426 ntBASIC8.29□□□□□ -1.08
APOBP04114 ELOBP2-201ENST00000526184 355 ntBASIC8.29□□□□□ -1.08
APOBP04114 AL606834.1-201ENST00000553836 1169 ntBASIC8.29□□□□□ -1.08
APOBP04114 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC8.29□□□□□ -1.08
APOBP04114 AFMID-205ENST00000586731 550 ntTSL 3 BASIC8.29□□□□□ -1.08
APOBP04114 AZU1P1-201ENST00000603479 385 ntBASIC8.29□□□□□ -1.08
APOBP04114 PRKN-210ENST00000612540 603 ntTSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC8.29□□□□□ -1.08
APOBP04114 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 AC020910.6-201ENST00000623084 1459 ntBASIC8.29□□□□□ -1.08
APOBP04114 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC8.29□□□□□ -1.08
APOBP04114 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC8.29□□□□□ -1.08
APOBP04114 AL078621.2-201ENST00000419351 698 ntBASIC8.29□□□□□ -1.08
APOBP04114 APRT-202ENST00000426324 664 ntTSL 2 BASIC8.29□□□□□ -1.08
APOBP04114 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC8.29□□□□□ -1.08
APOBP04114 TPI1P2-201ENST00000491343 752 ntBASIC8.29□□□□□ -1.08
APOBP04114 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC8.29□□□□□ -1.08
APOBP04114 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC8.29□□□□□ -1.08
APOBP04114 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
APOBP04114 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
APOBP04114 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC8.28□□□□□ -1.08
APOBP04114 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 AC073585.1-201ENST00000368895 1328 ntBASIC8.28□□□□□ -1.08
APOBP04114 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 SLC6A6P1-201ENST00000413933 1850 ntBASIC8.28□□□□□ -1.08
APOBP04114 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC8.28□□□□□ -1.08
APOBP04114 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
APOBP04114 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC8.28□□□□□ -1.08
APOBP04114 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
APOBP04114 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 AC111170.3-201ENST00000624282 2464 ntBASIC8.28□□□□□ -1.08
APOBP04114 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC8.28□□□□□ -1.08
APOBP04114 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 KRT18P63-201ENST00000505463 979 ntBASIC8.28□□□□□ -1.08
APOBP04114 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 PTMAP5-202ENST00000607242 1162 ntBASIC8.28□□□□□ -1.08
APOBP04114 RN7SL341P-201ENST00000613745 298 ntBASIC8.28□□□□□ -1.08
APOBP04114 uc_338.24-201ENST00000617802 182 ntBASIC8.28□□□□□ -1.08
APOBP04114 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms